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L3_105_000M1_scaffold_417

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_417_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

297..1454
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroidales RepID=C7XBC3_9PORP
two-component sensor histidine kinase
L3_105_000M1_scaffold_417_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1543..2133
DNA (591bp) protein (197aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=K5Z9T3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50087.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_000M1_scaffold_417_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2146..2331
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=14 Tax=Bacteroidales RepID=A7AJQ3_9PORP
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
50S ribosomal protein L32
L3_105_000M1_scaffold_417_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2435..3439
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=4 Tax=Bacteroidales RepID=FABH_PARD8
3-oxoacyl-ACP synthase
L3_105_000M1_scaffold_417_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3420..4313
DNA (894bp) protein (298aa)
GTPase Era n=9 Tax=Bacteroidales RepID=A6LEP6_PARD8
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
era; GTP-binding protein Era
L3_105_000M1_scaffold_417_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4338..5651
DNA (1314bp) protein (438aa)
GTPase Der n=2 Tax=Bacteroidales RepID=D0TI13_9BACE
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
engA; GTP-binding protein EngA
L3_105_000M1_scaffold_417_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5704..5979)
DNA (276bp) protein (92aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Parabacteroides RepID=E1Z0Q6_9PORP
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EKN23587.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000M1_scaffold_417_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5979..6185)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7XBD0_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08423.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_000M1_scaffold_417_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6300..7139)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ILC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50080.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hemagglutinin-like protein
L3_105_000M1_scaffold_417_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7695..8792
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZV9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12434.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
surface antigen BspA
L3_105_000M1_scaffold_417_11
unknown

Not on your lists

8813..9070
DNA (258bp) protein (86aa)

This feature has no annotations

L3_105_000M1_scaffold_417_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9453..9581)
DNA (129bp) protein (43aa)
Toxin-antitoxin system antitoxin component n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IXG5_9PORP
Toxin-antitoxin system antitoxin component {ECO:0000313|EMBL:CDB50076.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_000M1_scaffold_417_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9574..9882)
DNA (309bp) protein (103aa)
Toxin-antitoxin system toxin component n=2 Tax=Bacteroidales RepID=D7IR49_9BACE
Toxin-antitoxin system toxin component {ECO:0000313|EMBL:EFI08426.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000M1_scaffold_417_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9822..10073)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TI06_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82760.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_417_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10258..10851
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TI05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS68071.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_000M1_scaffold_417_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10912..13263)
DNA (2352bp) protein (784aa)
Glycosyl hydrolase, family 3 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IR52_9BACE
Glycosyl hydrolase, family 3 {ECO:0000313|EMBL:EFI08429.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
beta-glucosidase
L3_105_000M1_scaffold_417_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13448..15223)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEN8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS68076.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_417_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15281..16357)
DNA (1077bp) protein (359aa)
Putative heme biosynthesis protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEN7_PARD8
heme biosynthesis protein
Putative heme biosynthesis protein {ECO:0000313|EMBL:ABR44151.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_417_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16361..16831)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TI00_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54725.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_000M1_scaffold_417_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16835..17584)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZUL1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30652.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_417_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17714..19561
DNA (1848bp) protein (616aa)
ABC transporter, ATP-binding protein, MsbA family n=9 Tax=Bacteroidales RepID=A6LEN5_PARD8
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:KDS68074.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_417_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19644..22073
DNA (2430bp) protein (810aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0N8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23605.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycoside hydrolase
L3_105_000M1_scaffold_417_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22202..23422)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B474_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30655.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_417_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23463..24137)
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=9 Tax=Bacteroidales RepID=A6LEN2_PARD8
transcriptional regulator
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_417_25
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24169..24921)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Phosphate ABC transporter, ATP-binding protein n=6 Tax=Bacteroidales RepID=C7XBE4_9PORP
phosphate ABC transporter ATP-binding protein
L3_105_000M1_scaffold_417_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24937..25824)
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstA n=5 Tax=Bacteroidales RepID=D0THZ3_9BACE
ABC transporter permease
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:KEJ84069.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_105_000M1_scaffold_417_27
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25833..27020)
DNA (1188bp) protein (396aa)
Phosphate ABC transporter, permease protein PstC n=5 Tax=Bacteroidales RepID=D7IR62_9BACE
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDB50058.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_000M1_scaffold_417_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27200..28696)
DNA (1497bp) protein (499aa)
Acetyl-CoA hydrolase/transferase family protein n=4 Tax=Bacteroidales RepID=A6LEM8_PARD8
acetyl-CoA hydrolase/transferase
Acetyl-CoA hydrolase/transferase family protein {ECO:0000313|EMBL:ABR44142.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_417_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28798..29253)
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LEM7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS68069.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_417_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29514..30887
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=6 Tax=Bacteroidales RepID=MIAB_PARD8
(dimethylallyl)adenosine tRNA methylthiotransferase
Displaying items 1-30 of 94 in total

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