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L3_105_000M1_scaffold_424

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_424_1
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(177..1247)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KRV1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEX47278.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
hypothetical protein
L3_105_000M1_scaffold_424_2
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1250..1624)
DNA (375bp) protein (125aa)
DNA binding domain, excisionase family n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KRV0_9BACE
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEX47277.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
excisionase
L3_105_000M1_scaffold_424_3
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1724..2497)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KRU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEX47276.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
putative transmembrane protein
L3_105_000M1_scaffold_424_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2664..3779)
DNA (1116bp) protein (372aa)
Putative bacteriophage integrase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WQC5_BACF6
int; putative bacteriophage integrase
Putative bacteriophage integrase {ECO:0000313|EMBL:CBW21711.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_000M1_scaffold_424_5
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3894..4772)
DNA (879bp) protein (293aa)
DNA binding domain, excisionase family n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KRT1_9BACE
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEX47258.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
excisionase family DNA-binding
L3_105_000M1_scaffold_424_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5044..6429)
DNA (1386bp) protein (462aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
tRNA modification GTPase MnmE n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TH40_9BACE
trmE; tRNA modification GTPase TrmE
L3_105_000M1_scaffold_424_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6438..7556)
DNA (1119bp) protein (373aa)
Iron-sulfur cluster-binding protein n=2 Tax=Bacteroidales RepID=D7IRU1_9BACE
Fe-S center protein ferredoxin
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EFI08668.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_000M1_scaffold_424_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7634..8818
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TH38_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28656.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000M1_scaffold_424_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8840..9586
DNA (747bp) protein (249aa)
Nitroreductase family protein n=5 Tax=Bacteroidales RepID=C7XC56_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:EFK61265.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
oxidoreductase
L3_105_000M1_scaffold_424_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9576..10280)
DNA (705bp) protein (235aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Ribose 5-phosphate isomerase A n=2 Tax=Bacteroidales RepID=D7IRU4_9BACE
ribose 5-phosphate isomerase
L3_105_000M1_scaffold_424_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10294..11163)
DNA (870bp) protein (290aa)
Phosphorylase family n=3 Tax=Bacteroidales RepID=D0TH35_9BACE
Phosphorylase family protein {ECO:0000313|EMBL:EFI08672.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
phosphorylase
L3_105_000M1_scaffold_424_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11252..12244)
DNA (993bp) protein (331aa)
UPF0365 protein HMPREF0619_03051 n=4 Tax=Bacteroidales RepID=C7XC59_9PORP
UPF0365 protein HMPREF0619_03051 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_424_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12255..12743)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BS49_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30998.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_424_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12752..14200)
DNA (1449bp) protein (483aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRU8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08675.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_000M1_scaffold_424_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14314..15060
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84319.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_105_000M1_scaffold_424_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15062..15433
DNA (372bp) protein (124aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LDS9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN28664.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_000M1_scaffold_424_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15561..16460)
DNA (900bp) protein (300aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=4 Tax=Parabacteroides RepID=C7XC64_9PORP
L3_105_000M1_scaffold_424_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16460..17020)
DNA (561bp) protein (187aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LDS7_PARD8
hypothetical protein
Plasmid pRiA4b ORF-3-like family protein {ECO:0000313|EMBL:KDS64269.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_424_19
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17168..22519)
DNA (5352bp) protein (1784aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ASJ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31004.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
beta-agarase
L3_105_000M1_scaffold_424_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22539..26492)
DNA (3954bp) protein (1318aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B561_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31005.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_424_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26674..27120)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B4I8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31006.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_424_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27644..27907
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LDS5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43839.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_424_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27950..28576
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BS59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31008.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_000M1_scaffold_424_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28678..29463)
DNA (786bp) protein (262aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Acyl-(Acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase n=3 Tax=Parabacteroides RepID=A6LDS3_PARD8
L3_105_000M1_scaffold_424_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29481..30866)
DNA (1386bp) protein (462aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=5 Tax=Bacteroidales RepID=A6LDS2_PARD8
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
L3_105_000M1_scaffold_424_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30873..31916)
DNA (1044bp) protein (348aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
UDP-3-O-acylglucosamine N-acyltransferase n=4 Tax=Bacteroidales RepID=D0TH24_9BACE
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
L3_105_000M1_scaffold_424_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32006..32848)
DNA (843bp) protein (281aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Orotidine 5'-phosphate decarboxylase n=3 Tax=Bacteroidales RepID=D7IRV7_9BACE
orotidine 5'-phosphate decarboxylase
L3_105_000M1_scaffold_424_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32880..33989)
DNA (1110bp) protein (370aa)
Peptide chain release factor 1 n=8 Tax=Bacteroidales RepID=RF1_PARD8
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_424_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33999..35165)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7XC73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50423.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
phosphoribosylformylglycinamidine cyclo-ligase
L3_105_000M1_scaffold_424_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35212..36120)
DNA (909bp) protein (303aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=2 Tax=Bacteroides RepID=D0TH20_9BACE
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein {ECO:0000313|EMBL:KDS43827.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
glycoside hydrolase
Displaying items 1-30 of 67 in total

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