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L3_105_000M1_scaffold_427

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_427_1
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..131
DNA (129bp) protein (43aa)
Riboflavin biosynthesis protein RibBA n=3 Tax=Parabacteroides RepID=K5YIY6_9PORP
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_105_000M1_scaffold_427_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

213..1406
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=2 Tax=Parabacteroides RepID=N2B736_9PORP
Aspartate aminotransferase {ECO:0000313|EMBL:EOS16751.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
aspartate aminotransferase
L3_105_000M1_scaffold_427_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1488..2477)
DNA (990bp) protein (330aa)
Elongation factor Ts n=3 Tax=Parabacteroides RepID=K5ZDB6_9PORP
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
tsf; elongation factor Ts
L3_105_000M1_scaffold_427_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2636..3481)
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=3 Tax=Parabacteroides RepID=K5ZQQ9_9PORP
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
rpsB; 30S ribosomal protein S2
L3_105_000M1_scaffold_427_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3618..4004)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=3 Tax=Parabacteroides RepID=K5ZQ72_9PORP
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
rpsI; 30S ribosomal protein S9
L3_105_000M1_scaffold_427_6
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4010..4465)
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=3 Tax=Parabacteroides RepID=K5YIZ1_9PORP
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
rplM; 50S ribosomal protein L13
L3_105_000M1_scaffold_427_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4742..5383)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ADA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16756.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_427_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5581..9384
DNA (3804bp) protein (1268aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
DNA polymerase III, alpha subunit n=2 Tax=Parabacteroides RepID=N2B1D9_9PORP
DNA polymerase III subunit alpha
L3_105_000M1_scaffold_427_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9457..9771
DNA (315bp) protein (105aa)
Thioredoxin n=3 Tax=Parabacteroides RepID=K5ZQR3_9PORP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
thioredoxin
L3_105_000M1_scaffold_427_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9766..10467)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AWN4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16759.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_427_11
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10773..13163
DNA (2391bp) protein (797aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B2D6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57647.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
TonB dependent outer membrane protein
L3_105_000M1_scaffold_427_12
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13267..15939
DNA (2673bp) protein (891aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B729_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16761.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
two-component system sensor histidine kinase
L3_105_000M1_scaffold_427_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15947..16948)
DNA (1002bp) protein (334aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZDC8_9PORP
two-component system sensor histidine kinase
L3_105_000M1_scaffold_427_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16945..18309)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZQR9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13675.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
two-component system response regulator
L3_105_000M1_scaffold_427_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18487..19965
DNA (1479bp) protein (493aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AWN1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16764.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
putative outer membrane protein TolC
L3_105_000M1_scaffold_427_16
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19969..21219
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Parabacteroides RepID=N2B2D2_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EOS16765.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_427_17
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21248..23653
DNA (2406bp) protein (802aa)
Efflux ABC transporter, permease protein n=6 Tax=Bacteroides RepID=D1JNK1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB57657.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
probable ABC transporter permease
L3_105_000M1_scaffold_427_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23676..26069
DNA (2394bp) protein (798aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B726_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16766.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
probable ABC transporter permease
L3_105_000M1_scaffold_427_19
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26111..27268
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AV33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB48830.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
putative lipoprotein
L3_105_000M1_scaffold_427_20
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27302..29671
DNA (2370bp) protein (790aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1D1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57658.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
putative conserved membrane protein
L3_105_000M1_scaffold_427_21
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30307..33183)
DNA (2877bp) protein (959aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2ATC5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57659.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_105_000M1_scaffold_427_22
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33302..35752
DNA (2451bp) protein (817aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B2C7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16770.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
putative ABC transporter permease
L3_105_000M1_scaffold_427_23
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35767..38187
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZCC4_ODOSD
Uncharacterized protein {ECO:0000313|EMBL:KKB52094.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_105_000M1_scaffold_427_24
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38199..40505
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B722_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16771.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
putative ABC transport system, membrane protein
L3_105_000M1_scaffold_427_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40513..42825
DNA (2313bp) protein (771aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1C8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16772.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
putative ABC transport system, membrane protein
L3_105_000M1_scaffold_427_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42842..43894
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2ATC1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16773.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_427_27
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43962..46337
DNA (2376bp) protein (792aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AWM3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57666.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
efflux ABC transporter permease
L3_105_000M1_scaffold_427_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46483..48879
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YJ12_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13687.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
efflux ABC transporter permease
L3_105_000M1_scaffold_427_29
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48883..51297
DNA (2415bp) protein (805aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B720_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB52092.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_105_000M1_scaffold_427_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51309..53642
DNA (2334bp) protein (778aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1C4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16777.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
multidrug ABC transporter substrate-binding protein
Displaying items 1-30 of 42 in total

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