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L3_105_000M1_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_434_1
unknown

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_105_000M1_scaffold_434_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(106..789)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XE19_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50122.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_000M1_scaffold_434_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(798..1118)
DNA (321bp) protein (107aa)
UPF0145 protein BDI_2732 n=9 Tax=Bacteroidales RepID=Y2732_PARD8
hypothetical protein
UPF0145 protein HMPREF0619_03710 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_000M1_scaffold_434_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1213..3471)
DNA (2259bp) protein (753aa)
Glycoside hydrolase family 92 n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFI6_PARD8
Glycoside hydrolase family 92 {ECO:0000313|EMBL:ABR44450.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
glycoside hydrolase
L3_105_000M1_scaffold_434_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3611..3868
DNA (258bp) protein (86aa)
Sigma-70 region 2 n=4 Tax=Bacteroidales RepID=D0TG21_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EEY83045.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
RNA polymerase ECF-type sigma factor
L3_105_000M1_scaffold_434_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3887..4549
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6A4F8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49144.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_000M1_scaffold_434_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4604..4882
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83043.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_434_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4879..5505
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XE13_9PORP
surface protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50116.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_000M1_scaffold_434_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5445..5726)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XE12_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50115.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_000M1_scaffold_434_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5745..8975)
DNA (3231bp) protein (1077aa)
WD40-like protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG17_9BACE
WD40-like protein {ECO:0000313|EMBL:EEY83041.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Tricorn-like protease
L3_105_000M1_scaffold_434_11
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9069..11138
DNA (2070bp) protein (690aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZRU6_9PORP
Two-component system response regulator sensor kinase {ECO:0000313|EMBL:CDB49140.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
two-component regulator sensor kinase
L3_105_000M1_scaffold_434_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11228..12139)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YXY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61826.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_000M1_scaffold_434_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12947..16459
DNA (3513bp) protein (1171aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6A928_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24509.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_000M1_scaffold_434_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16695..17318)
DNA (624bp) protein (208aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C7XE07_9PORP
surface protein
Uncharacterized protein {ECO:0000313|EMBL:KDS73875.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_434_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17308..17646)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ARU8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61823.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_000M1_scaffold_434_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18052..21285
DNA (3234bp) protein (1078aa)
WD40-like protein n=2 Tax=Bacteroidales RepID=C7XE05_9PORP
WD40-like protein {ECO:0000313|EMBL:EEU50108.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
exported tricorn protease
L3_105_000M1_scaffold_434_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21366..21911
DNA (546bp) protein (182aa)
Exonuclease n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IUG0_9BACE
Exonuclease family protein {ECO:0000313|EMBL:KDS52485.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
DNA polymerase III subunit epsilon
L3_105_000M1_scaffold_434_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21912..23084)
DNA (1173bp) protein (391aa)
Serine/threonine transporter n=3 Tax=Bacteroidales RepID=D7IUG1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN24514.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Na+/H+-dicarboxylate symporter
L3_105_000M1_scaffold_434_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23053..24519)
DNA (1467bp) protein (489aa)
Na+/H+ antiporter NhaC n=5 Tax=Bacteroidales RepID=C7XE02_9PORP
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EEY83032.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Na+/H+ antiporter
L3_105_000M1_scaffold_434_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24603..26045)
DNA (1443bp) protein (481aa)
Na+/H+ antiporter n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFH1_PARD8
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:ABR44435.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_434_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26178..27137
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83029.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_434_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27214..27960)
DNA (747bp) protein (249aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=C7XDZ9_9PORP
glycosyl hydrolase
Putative glycosyl hydrolase {ECO:0000313|EMBL:KDS73865.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_000M1_scaffold_434_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27950..28243)
DNA (294bp) protein (98aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LFG8_PARD8
hypothetical protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK61815.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_000M1_scaffold_434_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28348..29592
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YXX2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24520.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
adenine-specific DNA methylase
L3_105_000M1_scaffold_434_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30311..30520
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFG6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44430.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_434_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30764..31453)
DNA (690bp) protein (230aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
NAD-dependent protein deacylase n=1 Tax=Parabacteroides sp. D25 RepID=K6ASB7_9PORP
NAD-dependent deacetylase
L3_105_000M1_scaffold_434_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31615..32202
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Peptidyl-prolyl cis-trans isomerase n=5 Tax=Bacteroidales RepID=D7IUH2_9BACE
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_434_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32223..32933
DNA (711bp) protein (237aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Peptidyl-prolyl cis-trans isomerase n=9 Tax=Bacteroidales RepID=A6LFG0_PARD8
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_434_29
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33118..33585
DNA (468bp) protein (156aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LFF9_PARD8
transcriptional regulator
Putative regulatory protein AsnC {ECO:0000313|EMBL:EEY83021.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_105_000M1_scaffold_434_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33687..35069
DNA (1383bp) protein (461aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EEY83020.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEY83020.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Peptidase, S8/S53 family n=4 Tax=Bacteroidales RepID=D0TFZ6_9BACE
subtilase family serine protease
Displaying items 1-30 of 54 in total

View Taxonomy