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L3_105_000M1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_445_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(74..685)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI93_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11186.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L3_105_000M1_scaffold_445_2
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

933..3587
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DJX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB46624.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_105_000M1_scaffold_445_3
unknown

Not on your lists

3589..4347
DNA (759bp) protein (253aa)

This feature has no annotations

L3_105_000M1_scaffold_445_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4344..5624
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5JSC9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS41432.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_000M1_scaffold_445_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5629..7767
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z8R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12004.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_445_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7764..8075
DNA (312bp) protein (104aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64Q59_BACFR
Uncharacterized protein {ECO:0000313|EMBL:KDS41434.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_000M1_scaffold_445_7
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8033..8509
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R1B3_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX61129.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
L3_105_000M1_scaffold_445_8
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8516..10177
DNA (1662bp) protein (554aa)
Putative lipoprotein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SSD6_BACT6
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADV45187.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_105_000M1_scaffold_445_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10264..12330
DNA (2067bp) protein (689aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AHG4_9PORP
L3_105_000M1_scaffold_445_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12390..13562
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZR9_9PORP
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:CDD12399.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminotransferase
L3_105_000M1_scaffold_445_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13664..14680
DNA (1017bp) protein (339aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1P0_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDD12397.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dehydrogenase
L3_105_000M1_scaffold_445_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14709..15179)
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=3 Tax=Parabacteroides RepID=A7AHG7_9PORP
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDN85784.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_105_000M1_scaffold_445_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15355..16644
DNA (1290bp) protein (430aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMI9_9PORP
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDD12393.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
O-acetylhomoserine (thiol)-lyase
L3_105_000M1_scaffold_445_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16794..17711)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7S2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12391.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_445_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17743..18630)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12390.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
membrane protease subunit, stomatin/prohibitin
L3_105_000M1_scaffold_445_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18633..19016)
DNA (384bp) protein (128aa)
Transcriptional regulator GntR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZQ5_9PORP
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDD12389.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative transcriptional regulator
L3_105_000M1_scaffold_445_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19183..23268)
DNA (4086bp) protein (1362aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides merdae RepID=A7AAX3_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN87949.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system sensor histidine kinase/response regulator
L3_105_000M1_scaffold_445_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23424..25028)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87950.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
xylose ABC transporter
L3_105_000M1_scaffold_445_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25077..26768)
DNA (1692bp) protein (564aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSM4_9PORP
SusD family protein {ECO:0000313|EMBL:CDD12380.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_445_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26792..29554)
DNA (2763bp) protein (921aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WMH5_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD12378.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor
L3_105_000M1_scaffold_445_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29592..31421)
DNA (1830bp) protein (610aa)
SusD family protein n=3 Tax=Parabacteroides RepID=R6Y1M0_9PORP
SusD family protein {ECO:0000313|EMBL:CDD12377.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_445_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31433..34561)
DNA (3129bp) protein (1043aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSL9_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD12375.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_445_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34695..34808)
DNA (114bp) protein (38aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12373.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_445_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35416..37683)
DNA (2268bp) protein (756aa)
TrkA C-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AAY1_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EDN87957.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sodium/proton antiporter
L3_105_000M1_scaffold_445_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38137..38568
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AAY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87959.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipoprotein
L3_105_000M1_scaffold_445_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39787..40080)
DNA (294bp) protein (98aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YEQ6_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN12022.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_445_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40092..40385)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A8M5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12023.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_445_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42007..42567
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z8S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12024.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_445_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43201..43548)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKK1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12026.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_105_000M1_scaffold_445_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43881..44879
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YER0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12027.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma factor
Displaying items 1-30 of 40 in total

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