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L3_105_000M1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_447_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(106..855)
DNA (750bp) protein (250aa)
4Fe-4S binding domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCC1_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCX73496.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_447_2
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(852..1262)
DNA (411bp) protein (137aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICI2_9FIRM
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_105_000M1_scaffold_447_3
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1954..2457
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PKY9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHO85723.1}; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
L3_105_000M1_scaffold_447_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2514..3497
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27738.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_105_000M1_scaffold_447_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3516..3839
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31759.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_105_000M1_scaffold_447_6
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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3949..4581
DNA (633bp) protein (211aa)
von Willebrand factor type A domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I328_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDB44528.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
von Willebrand factor type A
L3_105_000M1_scaffold_447_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4630..5376)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A8N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54675.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Acetyltransferase (GNAT) family.
L3_105_000M1_scaffold_447_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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5869..6558
DNA (690bp) protein (230aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMR6_9FIRM
L3_105_000M1_scaffold_447_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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6752..7897
DNA (1146bp) protein (382aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH65_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RpoD4; RNA polymerase sigma factor RpoD
L3_105_000M1_scaffold_447_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(7997..9388)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAJ7_9FIRM
L3_105_000M1_scaffold_447_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(9537..9815)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87961.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_105_000M1_scaffold_447_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9812..10525)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50762.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_447_13
unknown

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comp(10591..10767)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_105_000M1_scaffold_447_14
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10785..14027)
DNA (3243bp) protein (1081aa)
Surface protein C n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EM89_9FIRM
Surface protein C {ECO:0000313|EMBL:CDE03571.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_105_000M1_scaffold_447_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

14736..16076
DNA (1341bp) protein (447aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY42_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDB87031.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative hydrolase
L3_105_000M1_scaffold_447_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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16173..19115
DNA (2943bp) protein (981aa)
Putative oxidoreductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC30_9FIRM
Putative oxidoreductase {ECO:0000313|EMBL:CDA81761.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative oxidoreductase
L3_105_000M1_scaffold_447_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19174..19605
DNA (432bp) protein (144aa)
Oxidoreductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6R8H9_9CLOT
Oxidoreductase {ECO:0000313|EMBL:CDC45223.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_105_000M1_scaffold_447_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19595..20335
DNA (741bp) protein (247aa)
Sel1 repeat protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW29_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:CDB25481.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_105_000M1_scaffold_447_19
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(20391..21983)
DNA (1593bp) protein (531aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EZ84_9FIRM
L3_105_000M1_scaffold_447_20
unknown

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comp(22096..22599)
DNA (504bp) protein (168aa)

This feature has no annotations

L3_105_000M1_scaffold_447_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22836..23951
DNA (1116bp) protein (372aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEU96833.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aldo/keto reductase
L3_105_000M1_scaffold_447_22
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

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24228..27437
DNA (3210bp) protein (1070aa)
Ig-like domain-containing surface protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J0T7_9BACT
Cell surface protein {ECO:0000313|EMBL:EFI17111.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
Ig-like domain-containing surface protein
L3_105_000M1_scaffold_447_23
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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27570..28214
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QRP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC35699.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_105_000M1_scaffold_447_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28211..29503)
DNA (1293bp) protein (431aa)
RNA polymerase sigma-54 factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE0_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGJ46440.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RNA polymerase sigma-54 factor
L3_105_000M1_scaffold_447_25
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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29674..30093
DNA (420bp) protein (140aa)
PTS system fructose IIA protein n=1 Tax=Anaerostipes sp. 3_2_56FAA RepID=E5VRL0_9FIRM
PTS system fructose IIA protein {ECO:0000313|EMBL:EFV23492.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
putative PTS system, galactosamine-specific IIA component
L3_105_000M1_scaffold_447_26
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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30131..32929
DNA (2799bp) protein (933aa)
PTS system transcriptional activator n=1 Tax=Acetonema longum DSM 6540 RepID=F7NLJ2_9FIRM
PTS system transcriptional activator {ECO:0000313|EMBL:EGO63087.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
PTS system transcriptional activator
L3_105_000M1_scaffold_447_27
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32976..33242
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family n=2 Tax=Clostridiales RepID=A5ZX47_9FIRM
Phosphocarrier HPr family {ECO:0000313|EMBL:CDD86057.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
PTS system HPr phosphocarrier
L3_105_000M1_scaffold_447_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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33286..34950
DNA (1665bp) protein (555aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AR67_9CLOT
phosphotransferase system enzyme I
L3_105_000M1_scaffold_447_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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35174..35941
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64186.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
short-chain dehydrogenase/reductase SDR
L3_105_000M1_scaffold_447_30
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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35957..37678
DNA (1722bp) protein (574aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E2I4_9FIRM
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDA91454.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying items 1-30 of 55 in total

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