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L3_105_000M1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_451_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134..1690
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YGJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07369.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNA methylase
L3_105_000M1_scaffold_451_2
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

1760..2914
DNA (1155bp) protein (385aa)
Fic family protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BL58_9FIRM
Fic family protein {ECO:0000313|EMBL:CDD66499.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L3_105_000M1_scaffold_451_3
unknown

Not on your lists

2980..3342
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UG15_RUMA7
hypothetical protein
L3_105_000M1_scaffold_451_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3339..4343
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0A5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27465.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_105_000M1_scaffold_451_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4306..4641
DNA (336bp) protein (112aa)
DpnD protein n=2 Tax=root RepID=E7GBT1_9FIRM
DpnD protein {ECO:0000313|EMBL:EFW04493.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_105_000M1_scaffold_451_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4890..5225
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B130_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49250.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Bacterial mobilisation protein (MobC).
L3_105_000M1_scaffold_451_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5216..6544
DNA (1329bp) protein (443aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JR94_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBK95613.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_451_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6537..7265
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YGJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07374.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_105_000M1_scaffold_451_9
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7271..8125
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PBC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK40969.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
hypothetical protein
L3_105_000M1_scaffold_451_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8129..8320
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4W8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49249.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_451_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8307..10106
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YHT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07377.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Type IV secretory pathway, VirD4 components
L3_105_000M1_scaffold_451_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10118..10474
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34065.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000M1_scaffold_451_13
unknown

Not on your lists

comp(10514..10978)
DNA (465bp) protein (155aa)

This feature has no annotations

L3_105_000M1_scaffold_451_14
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11074..11910
DNA (837bp) protein (279aa)
Putative membrane protein n=1 Tax=Clostridium difficile P51 RepID=T4RVS9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCZ05251.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_105_000M1_scaffold_451_15
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11922..12296
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KI38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66465.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_451_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12280..14610
DNA (2331bp) protein (777aa)
TrsE-like protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KZL2_9CLOT
TrsE-like protein {ECO:0000313|EMBL:CCY66466.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Domain of unknown function DUF87.
L3_105_000M1_scaffold_451_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14681..15412
DNA (732bp) protein (244aa)
SrtB family sortase n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CJL1_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENZ61138.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
sortase, SrtB family
L3_105_000M1_scaffold_451_18
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15414..17102
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KI67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66468.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_451_19
unknown

Not on your lists

comp(17366..17836)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_105_000M1_scaffold_451_20
Eimeria praecox, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(17847..18287)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Eimeria praecox RepID=U6G596_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDI73804.1}; TaxID=51316 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria praecox.;"
L3_105_000M1_scaffold_451_21
unknown

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comp(18277..18402)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_105_000M1_scaffold_451_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18405..21584)
DNA (3180bp) protein (1060aa)
Subtilisin-like serine protease n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QA13_9FIRM
Subtilisin-like serine protease {ECO:0000313|EMBL:CDC32645.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L3_105_000M1_scaffold_451_23
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21604..26763)
DNA (5160bp) protein (1720aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NYZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11486.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
putative cell wall associated protein
L3_105_000M1_scaffold_451_24
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26977..28266)
DNA (1290bp) protein (430aa)
Sensor histidine kinase putative VirS n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1D0_9CLOT
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CCY67096.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_451_25
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28268..29029)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67095.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Response regulator of the LytR/AlgR family
L3_105_000M1_scaffold_451_26
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29083..29406)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSV6_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:EHQ87919.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
transcriptional regulator
L3_105_000M1_scaffold_451_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29612..29800
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32909.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L3_105_000M1_scaffold_451_28
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29790..30377
DNA (588bp) protein (196aa)
Accessory gene regulator B n=1 Tax=Clostridium sp. CAG:678 RepID=R5L235_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:CCY67092.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
AIP processing-secretion protein
L3_105_000M1_scaffold_451_29
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30669..31193
DNA (525bp) protein (175aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium sp. CAG:678 RepID=R5KI63_9CLOT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCY66485.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
RNA polymerase sigma factor, sigma-70 family
L3_105_000M1_scaffold_451_30
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31606..31977
DNA (372bp) protein (124aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
mRNA interferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KZN5_9CLOT
Growth inhibitor
Displaying items 1-30 of 140 in total

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