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L3_105_000M1_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_469_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..219)
DNA (219bp) protein (73aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
DNA gyrase subunit A n=2 Tax=Parabacteroides RepID=E1YVA4_9PORP
DNA gyrase subunit A
L3_105_000M1_scaffold_469_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

523..3177
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AK71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16128.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
negative regulator of genetic competence
L3_105_000M1_scaffold_469_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3290..4204
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZK62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16129.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_469_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4213..5595
DNA (1383bp) protein (461aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AEC3_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN86399.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter
L3_105_000M1_scaffold_469_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5889..8030
DNA (2142bp) protein (714aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BGD1_9PORP
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDD12432.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA-binding protein
L3_105_000M1_scaffold_469_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8036..8518
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=3 Tax=Parabacteroides merdae RepID=A7AEC0_9PORP
transcriptional regulator
L3_105_000M1_scaffold_469_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8750..9544)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4W1R9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EFR55534.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L3_105_000M1_scaffold_469_8
unknown

Not on your lists

comp(9552..10214)
DNA (663bp) protein (221aa)

This feature has no annotations

L3_105_000M1_scaffold_469_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10882..11721
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12435.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hemagglutinin-like protein
L3_105_000M1_scaffold_469_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11877..12278)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86393.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_469_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12381..13493
DNA (1113bp) protein (371aa)
Glycosyl hydrolase, family 43 (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8M9_9PORP
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEC97222.1}; Flags: Fragment;; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
glycoside hydrolase family protein
L3_105_000M1_scaffold_469_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13562..14689)
DNA (1128bp) protein (376aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis hisB n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXF2_9PORP
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_105_000M1_scaffold_469_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14694..15725)
DNA (1032bp) protein (344aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Histidinol-phosphate aminotransferase n=2 Tax=Parabacteroides johnsonii RepID=B7B8M7_9PORP
histidinol-phosphate aminotransferase
L3_105_000M1_scaffold_469_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15722..17011)
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Histidinol dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBC1_9PORP
hisD; histidinol dehydrogenase
L3_105_000M1_scaffold_469_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17045..17896)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=2 Tax=Parabacteroides merdae RepID=A7AEB2_9PORP
L3_105_000M1_scaffold_469_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18150..20696)
DNA (2547bp) protein (849aa)
Peptidase family M1 n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8M2_9PORP
Peptidase family M1 {ECO:0000313|EMBL:EEC97215.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
aminopeptidase
L3_105_000M1_scaffold_469_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20713..21168)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3X0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07782.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_105_000M1_scaffold_469_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21169..24030)
DNA (2862bp) protein (954aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z8V7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07781.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
M16 family peptidase
L3_105_000M1_scaffold_469_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24362..24868
DNA (507bp) protein (169aa)
Cupin domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAR8_9BACE
Cupin domain protein {ECO:0000313|EMBL:EEY84331.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
cupin
L3_105_000M1_scaffold_469_20
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24888..25832
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9HDE7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY50670.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
putative aldo/keto reductase
L3_105_000M1_scaffold_469_21
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25848..26858
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JDA2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY50669.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
putative amidohydrolase
L3_105_000M1_scaffold_469_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27044..27880
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AK86_9PORP
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EDN86383.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_469_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27834..28148
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AK86_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76357.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L3_105_000M1_scaffold_469_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28425..29690
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZK80_9PORP
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDD13635.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
membrane transport protein
L3_105_000M1_scaffold_469_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29768..32044
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZXU0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16145.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_469_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32078..34336
DNA (2259bp) protein (753aa)
alpha-N-acetylglucosaminidase (EC:3.2.1.50)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BGE8_9PORP
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EDN86380.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_000M1_scaffold_469_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34358..37174
DNA (2817bp) protein (939aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A7G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16147.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
alpha-galactosidase
L3_105_000M1_scaffold_469_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37189..39873
DNA (2685bp) protein (895aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWX1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11449.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_469_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41015..42451
DNA (1437bp) protein (479aa)
Lactaldehyde dehydrogenase n=3 Tax=Parabacteroides RepID=A7ALT0_9PORP
Lactaldehyde dehydrogenase {ECO:0000313|EMBL:EDN84326.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aldehyde dehydrogenase
L3_105_000M1_scaffold_469_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42551..43039)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZXU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16150.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
NADH:ubiquinone oxidoreductase subunit
Displaying items 1-30 of 68 in total

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