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L3_105_000M1_scaffold_478

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_478_1
unknown

Not on your lists

1..111
DNA (111bp) protein (37aa)

This feature has no annotations

L3_105_000M1_scaffold_478_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(152..1345)
DNA (1194bp) protein (398aa)
Aminotransferase class I/II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4Z7_9PORP
Aminotransferase class I/II {ECO:0000313|EMBL:CDD13467.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aspartate aminotransferase
L3_105_000M1_scaffold_478_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1371..2588)
DNA (1218bp) protein (406aa)
Riboflavin biosynthesis protein RibBA n=3 Tax=Parabacteroides RepID=A7ADX2_9PORP
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_105_000M1_scaffold_478_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2615..4552)
DNA (1938bp) protein (646aa)
Permease YjgP/YjgQ family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Y4_9PORP
Permease YjgP/YjgQ family {ECO:0000313|EMBL:CDD13469.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4654..5037)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13470.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_6
unknown

Not on your lists

5165..5275
DNA (111bp) protein (37aa)

This feature has no annotations

L3_105_000M1_scaffold_478_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5792..6715)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ADW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87261.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipoprotein
L3_105_000M1_scaffold_478_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7775..9829
DNA (2055bp) protein (685aa)
Response regulator receiver domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y502_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD13472.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system sensor histidine kinase/response regulator
L3_105_000M1_scaffold_478_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10242..11510
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQ76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13473.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fimbrilin
L3_105_000M1_scaffold_478_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11754..12965
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Z0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13474.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fimbrilin
L3_105_000M1_scaffold_478_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13002..13904
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13475.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lipoprotein
L3_105_000M1_scaffold_478_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13941..15971
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAW5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13476.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_478_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15984..17099
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ADW3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87255.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_478_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17157..18494
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQ82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13478.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18717..19805
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Z6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13479.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_478_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19859..21367
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13480.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_478_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21852..23963
DNA (2112bp) protein (704aa)
VirE N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADV9_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN87251.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative helicase
L3_105_000M1_scaffold_478_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24082..24477
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A7ADV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87250.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_478_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24711..25268
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BPV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13488.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25277..26743
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87247.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_478_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26845..27189
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZCY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13490.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27363..28001)
DNA (639bp) protein (213aa)
Thiamine diphosphokinase n=2 Tax=Parabacteroides RepID=A7ADV3_9PORP
Thiamine diphosphokinase {ECO:0000313|EMBL:CDD13491.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_478_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27985..28602)
DNA (618bp) protein (206aa)
Nicotinamide mononucleotide transporter PnuC n=4 Tax=Parabacteroides RepID=A7ADV2_9PORP
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EDN87244.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nicotinamide mononucleotide transport membrane protein
L3_105_000M1_scaffold_478_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28603..30810)
DNA (2208bp) protein (736aa)
TonB-dependent receptor plug domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADV1_9PORP
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EDN87243.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent transmembrane receptor protein
L3_105_000M1_scaffold_478_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31194..31667
DNA (474bp) protein (158aa)
Ribosome maturation factor RimP n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADV0_9PORP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_478_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31675..32949
DNA (1275bp) protein (425aa)
Transcription termination factor NusA n=4 Tax=Parabacteroides RepID=A7ADU9_9PORP
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
nusA; transcription elongation factor NusA
L3_105_000M1_scaffold_478_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32970..35942
DNA (2973bp) protein (991aa)
Translation initiation factor IF-2 n=2 Tax=Parabacteroides RepID=K6B2Y4_9PORP
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
infB; translation initiation factor IF-2
L3_105_000M1_scaffold_478_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35945..36436
DNA (492bp) protein (164aa)
CvpA family protein n=3 Tax=Parabacteroides RepID=A7ADU7_9PORP
CvpA family protein {ECO:0000313|EMBL:EDN87239.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_478_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36470..37915
DNA (1446bp) protein (482aa)
FeS assembly protein SufB n=4 Tax=Parabacteroides RepID=A7ADU6_9PORP
UPF0051 protein {ECO:0000313|EMBL:EKN09088.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
cysteine desulfurase activator complex subunit SufB
L3_105_000M1_scaffold_478_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38004..38759
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZT80_9PORP
FeS assembly ATPase SufC {ECO:0000313|EMBL:EKN09089.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 41 in total

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