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L3_105_000M1_scaffold_490

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_490_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

480..1070
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A906_9PORP
Putative ATP synthase, subunit E {ECO:0000313|EMBL:EDN86863.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP synthase subunit E
L3_105_000M1_scaffold_490_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1072..1944
DNA (873bp) protein (291aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFN6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86862.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_490_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2054..3811
DNA (1758bp) protein (586aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
V-type ATP synthase subunit A (EC:3.6.3.14)
ATP synthase alpha/beta family, nucleotide-binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFN5_9PORP
L3_105_000M1_scaffold_490_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3820..5139
DNA (1320bp) protein (440aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
ATP synthase alpha/beta family, nucleotide-binding domain protein n=4 Tax=Parabacteroides RepID=A7AFN4_9PORP
ATP synthase alpha/beta family, nucleotide-binding domain protein {ECO:0000313|EMBL:EDN86860.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_000M1_scaffold_490_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5215..5838
DNA (624bp) protein (208aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATPase, D subunit n=4 Tax=Parabacteroides RepID=A7AFN3_9PORP
V-type ATPase, D subunit {ECO:0000313|EMBL:EDN86859.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_000M1_scaffold_490_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5835..7655
DNA (1821bp) protein (607aa)
V-type ATPase 116kDa subunit family protein n=2 Tax=Parabacteroides merdae RepID=A7AFN2_9PORP
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
V-type ATPase subunit I
L3_105_000M1_scaffold_490_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7732..8184
DNA (453bp) protein (151aa)
ATP synthase subunit C n=3 Tax=Parabacteroides RepID=A7AFN1_9PORP
ATP synthase subunit C {ECO:0000313|EMBL:EDN86857.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
V-type ATPase subunit K
L3_105_000M1_scaffold_490_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8314..10752
DNA (2439bp) protein (813aa)
Peptidase, S9A/B/C family, catalytic domain protein n=3 Tax=Parabacteroides RepID=A7AFN0_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD12794.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dipeptidyl peptidase IV
L3_105_000M1_scaffold_490_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10794..11078)
DNA (285bp) protein (95aa)
DNA-binding protein HU n=4 Tax=Parabacteroides RepID=A7AFM9_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN86855.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-binding protein HU-beta
L3_105_000M1_scaffold_490_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12370..13206)
DNA (837bp) protein (279aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12792.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_000M1_scaffold_490_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13615..13989
DNA (375bp) protein (125aa)
Transcriptional regulator, BlaI/MecI/CopY family n=4 Tax=Parabacteroides RepID=A7AFM3_9PORP
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CDD12791.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative regulatory protein
L3_105_000M1_scaffold_490_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14031..15239
DNA (1209bp) protein (403aa)
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSQ6_9PORP
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region {ECO:0000313|EMBL:EKN14561.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_490_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15247..16485
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0U2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12789.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative lipoprotein
L3_105_000M1_scaffold_490_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16588..17565
DNA (978bp) protein (326aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZFU1_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDD12788.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_490_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17643..20138)
DNA (2496bp) protein (832aa)
O-GlcNAcase BT_4395 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y2Y0_9PORP
O-GlcNAcase BT_4395 {ECO:0000313|EMBL:CDD12787.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_105_000M1_scaffold_490_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20166..20294
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X8V7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12786.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_490_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20329..22023)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14557.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_000M1_scaffold_490_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22068..24035)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AFL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86843.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_490_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24089..25204)
DNA (1116bp) protein (372aa)
O-succinylbenzoic acid--CoA ligase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNG3_9PORP
O-succinylbenzoic acid--CoA ligase {ECO:0000313|EMBL:CDD12783.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
O-succinylbenzoate--CoA ligase
L3_105_000M1_scaffold_490_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25179..26228)
DNA (1050bp) protein (350aa)
O-succinylbenzoate synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFT8_9PORP
Putative o-succinylbenzoate synthase {ECO:0000313|EMBL:EDN86841.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative muconate cycloisomerase
L3_105_000M1_scaffold_490_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26241..27065)
DNA (825bp) protein (275aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=5 Tax=Parabacteroides RepID=A7AFL4_9PORP
L3_105_000M1_scaffold_490_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27103..28767)
DNA (1665bp) protein (555aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=2 Tax=Parabacteroides merdae RepID=A7AFL3_9PORP
2-oxoglutarate decarboxylase
L3_105_000M1_scaffold_490_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28931..32797)
DNA (3867bp) protein (1289aa)
F5/8 type C domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFL2_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:EDN86838.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative glycosyl hydrolase
L3_105_000M1_scaffold_490_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33149..34216
DNA (1068bp) protein (356aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNF9_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD12778.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lipoprotein
L3_105_000M1_scaffold_490_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34216..37344
DNA (3129bp) protein (1043aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFL0_9PORP
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDN86836.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
multidrug transporter AcrB
L3_105_000M1_scaffold_490_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37344..38711
DNA (1368bp) protein (456aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides merdae RepID=A7AFK9_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN86835.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane efflux protein
L3_105_000M1_scaffold_490_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38871..39902
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86834.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_000M1_scaffold_490_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39960..40241
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12774.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_490_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40443..40589
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WNF4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12773.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_105_000M1_scaffold_490_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40807..41892)
DNA (1086bp) protein (362aa)
Permease, YjgP/YjgQ family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK4_9PORP
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EDN86830.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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