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L3_105_000M1_scaffold_514

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_514_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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2..667
DNA (666bp) protein (222aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1W1_OSCVS
putative site-specific recombinase
Putative site-specific recombinase {ECO:0000313|EMBL:CCY40883.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_105_000M1_scaffold_514_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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678..1976
DNA (1299bp) protein (433aa)
Site-specific DNA recombinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITE5_9FIRM
Site-specific DNA recombinase {ECO:0000313|EMBL:CCY43609.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Site-specific DNA recombinase
L3_105_000M1_scaffold_514_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1954..2817)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSX9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76875.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_105_000M1_scaffold_514_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2824..3867)
DNA (1044bp) protein (348aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Putative DNA (Cytosine-5-)-methyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSX8_9BIFI
DNA modification methyltransferase
L3_105_000M1_scaffold_514_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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4445..6106
DNA (1662bp) protein (554aa)
Translation elongation factor G n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZ77_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:CDA80895.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
fusA; putative elongation factor G
L3_105_000M1_scaffold_514_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6085..6381
DNA (297bp) protein (99aa)
Translation elongation factor G n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFW9_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:CCX74806.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
fusA; putative elongation factor G
L3_105_000M1_scaffold_514_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6455..7825)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Y9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73847.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
putative efflux protein, MATE family
L3_105_000M1_scaffold_514_8
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7842..8447)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DGR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87763.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L3_105_000M1_scaffold_514_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(8469..12470)
DNA (4002bp) protein (1334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88318.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_105_000M1_scaffold_514_10
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(12454..14901)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LX77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88319.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RND family transporter
L3_105_000M1_scaffold_514_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14898..15152)
DNA (255bp) protein (85aa)
XRE family transcriptional regulator n=3 Tax=Clostridium clostridioforme RepID=N9YDD4_9CLOT
XRE family transcriptional regulator {ECO:0000313|EMBL:ENZ65551.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
putative transcriptional regulator
L3_105_000M1_scaffold_514_12
unknown

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15279..15464
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_000M1_scaffold_514_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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15413..16225
DNA (813bp) protein (271aa)
Putative small-conductance mechanosensitive channel n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T8D6_9FIRM
Putative small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDC68465.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative small-conductance mechanosensitive channel
L3_105_000M1_scaffold_514_14
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16415..17269)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036B2840
Uncharacterized protein {ECO:0000313|EMBL:ETA82145.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
RpiR family transcriptional regulator
L3_105_000M1_scaffold_514_15
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17487..18854
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BXJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60248.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Na+/H+ antiporter
L3_105_000M1_scaffold_514_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18894..20183
DNA (1290bp) protein (430aa)
Aminotransferase class V n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ93_ALKOO
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ABW19875.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L3_105_000M1_scaffold_514_17
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20362..20715
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FP46_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05414.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_105_000M1_scaffold_514_18
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20708..20884
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FP46_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05414.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_105_000M1_scaffold_514_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(21036..22094)
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBS5_9FIRM
histidine kinase
L3_105_000M1_scaffold_514_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(22081..22773)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUL7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA81627.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_105_000M1_scaffold_514_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

22904..23764
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81628.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
degV family protein
L3_105_000M1_scaffold_514_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23975..24796
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH87_9CLOT
LPS:glycosyltransferase {ECO:0000313|EMBL:EXG84342.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
RfaJ; lipopolysaccharide biosynthesis protein
L3_105_000M1_scaffold_514_23
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

25176..25619
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MR58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88322.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_105_000M1_scaffold_514_24
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

25629..26477
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LLI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88323.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
EDD domain protein, DegV family
L3_105_000M1_scaffold_514_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26694..28274)
DNA (1581bp) protein (527aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY20_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CDB41920.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_105_000M1_scaffold_514_26
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28353..30449)
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W5A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD01909.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_105_000M1_scaffold_514_27
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30744..31838
DNA (1095bp) protein (365aa)
Class II glutamine amidotransferase n=1 Tax=Ruminococcus albus 8 RepID=E9SFW2_RUMAL
Class II glutamine amidotransferase {ECO:0000313|EMBL:EGC01878.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
GltB; glutamate synthase domain 1
L3_105_000M1_scaffold_514_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31838..33343
DNA (1506bp) protein (502aa)
Glutamate synthase n=4 Tax=Lachnospiraceae RepID=E5XHL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88466.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
GltB; glutamate synthase domain 2
L3_105_000M1_scaffold_514_29
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33378..34100
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WCL8_9FIRM
Glutamate synthase {ECO:0000313|EMBL:EXM37493.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
GltB; glutamate synthase domain 3
L3_105_000M1_scaffold_514_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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34118..35329
DNA (1212bp) protein (404aa)
Glutamine synthetase, type I n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB05_9FIRM
Glutamine synthetase, type I {ECO:0000313|EMBL:EGJ47533.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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