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L3_105_000M1_scaffold_518

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_518_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1938
DNA (1938bp) protein (646aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Ribosomal protein L7/L12 n=2 Tax=unclassified Lachnospiraceae RepID=E5XGJ3_9FIRM
Ribosomal protein L7/L12 {ECO:0000313|EMBL:EFV19563.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000M1_scaffold_518_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1943..4012
DNA (2070bp) protein (690aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19564.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4032..4442
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19565.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4457..5635
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19566.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000M1_scaffold_518_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6168..6365)
DNA (198bp) protein (66aa)
Conserved domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKZ1_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EDK25092.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Transposase domain (DUF772).
L3_105_000M1_scaffold_518_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6466..7131
DNA (666bp) protein (222aa)
Regulatory protein VanR n=4 Tax=Lachnospiraceae RepID=E5XGJ7_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFV19567.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7220..8134
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein n=4 Tax=Lachnospiraceae RepID=A5KKY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81660.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8127..8951
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19569.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_9
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8963..9865
DNA (903bp) protein (301aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Lachnospiraceae RepID=A5KKY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81658.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
histidine kinase
L3_105_000M1_scaffold_518_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10185..12422
DNA (2238bp) protein (746aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19571.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12759..13133)
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=4 Tax=Lachnospiraceae RepID=A5KKY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81656.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Helix-turn-helix.
L3_105_000M1_scaffold_518_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13439..14665
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AY02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82165.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14667..16463)
DNA (1797bp) protein (599aa)
Regulatory protein blaR1 n=4 Tax=Lachnospiraceae RepID=E5XGK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82164.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Beta-lactamase
L3_105_000M1_scaffold_518_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16465..16851)
DNA (387bp) protein (129aa)
Penicillinase repressor n=4 Tax=Lachnospiraceae RepID=A5KKY1_9FIRM
Methicillin-resistance regulatory protein MecI {ECO:0000313|EMBL:EFV19575.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
penicillinase repressor
L3_105_000M1_scaffold_518_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17254..20358
DNA (3105bp) protein (1035aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JDN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82162.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20352..20498
DNA (147bp) protein (49aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A5KKX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82161.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_105_000M1_scaffold_518_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20551..21168
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KKX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25078.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_105_000M1_scaffold_518_18
unknown

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21413..21592
DNA (180bp) protein (60aa)

This feature has no annotations

L3_105_000M1_scaffold_518_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21589..21750
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25077.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L3_105_000M1_scaffold_518_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21853..23841
DNA (1989bp) protein (663aa)
UvrABC system protein B n=4 Tax=Lachnospiraceae RepID=A5KKX4_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
excinuclease ABC, B subunit
L3_105_000M1_scaffold_518_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23885..26722
DNA (2838bp) protein (946aa)
UvrABC system protein A n=4 Tax=Lachnospiraceae RepID=A5KKX3_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
excinuclease ABC, A subunit
L3_105_000M1_scaffold_518_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27135..28124
DNA (990bp) protein (330aa)
Cell shape determining protein, MreB/Mrl family n=5 Tax=Clostridiales RepID=A5KKX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26503.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
rod shape-determining protein MreB
L3_105_000M1_scaffold_518_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28250..30478
DNA (2229bp) protein (743aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family Helicase n=5 Tax=Clostridiales RepID=E5XGL3_9FIRM
L3_105_000M1_scaffold_518_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30583..31158
DNA (576bp) protein (192aa)
ComF family protein n=4 Tax=Clostridiales RepID=A5KKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26501.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted amidophosphoribosyltransferases
L3_105_000M1_scaffold_518_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31216..31653
DNA (438bp) protein (146aa)
Conserved domain protein n=5 Tax=Clostridiales RepID=A5KKW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19585.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_105_000M1_scaffold_518_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31656..32714
DNA (1059bp) protein (353aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KKW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26499.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000M1_scaffold_518_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32747..33610
DNA (864bp) protein (288aa)
TIGR00159 family protein n=5 Tax=Clostridiales RepID=A5KKW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19587.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
conserved hypothetical protein TIGR00159
L3_105_000M1_scaffold_518_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33607..34899
DNA (1293bp) protein (431aa)
YbbR-like protein n=3 Tax=Clostridiales RepID=A5KKW5_9FIRM
YbbR-like protein {ECO:0000313|EMBL:CCZ26497.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000M1_scaffold_518_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34986..35258
DNA (273bp) protein (91aa)
Phosphocarrier, HPr family n=5 Tax=Clostridiales RepID=A5KKW4_9FIRM
Phosphocarrier HPr family {ECO:0000313|EMBL:CCZ26496.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Phosphotransferase System HPr (HPr) Family
L3_105_000M1_scaffold_518_30
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35296..36207
DNA (912bp) protein (304aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26495.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
dTDP-glucose pyrophosphorylase
Displaying items 1-30 of 45 in total

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