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L3_105_000M1_scaffold_565

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_565_1
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2..787)
DNA (786bp) protein (262aa)
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit id=3414627 bin=GWF2_Lentisphaerae_52_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_44_16_curated
L3_105_000M1_scaffold_565_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(799..1470)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000365C862
Uncharacterized protein {ECO:0000313|EMBL:EHB92206.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_565_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1467..2165)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DAF422
Uncharacterized protein {ECO:0000313|EMBL:EHB92207.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_565_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2216..3634)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9H2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92209.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_105_000M1_scaffold_565_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3705..4370
DNA (666bp) protein (222aa)
Zn-dependent hydrolase n=1 Tax=Alistipes sp. AP11 RepID=UPI00030B7DD2
Uncharacterized protein {ECO:0000313|EMBL:EHB92210.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Zn-dependent hydrolases, including glyoxylases
L3_105_000M1_scaffold_565_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4391..5176
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037A5C2C
Methyltransferase FkbM family {ECO:0000313|EMBL:CCZ95883.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
FkbM family methyltransferase
L3_105_000M1_scaffold_565_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5167..5841
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=4 Tax=root RepID=B0MTY9_9BACT
L3_105_000M1_scaffold_565_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5894..7030
DNA (1137bp) protein (379aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030E881C
Lipid-A-disaccharide synthetase {ECO:0000313|EMBL:EHB92212.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_565_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7027..7650
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9H6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92213.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
L3_105_000M1_scaffold_565_10
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7679..8257
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=U6R950_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52945.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
cAMP-binding domain-containing regulatory protein
L3_105_000M1_scaffold_565_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8325..9059
DNA (735bp) protein (245aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INZ9_9BACT
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CBK64661.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_105_000M1_scaffold_565_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9184..9789
DNA (606bp) protein (202aa)
Maf-like protein HMPREF9450_02264 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H9H8_9BACT
Maf-like protein HMPREF9450_02264 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
MAF protein
L3_105_000M1_scaffold_565_13
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9847..11787
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NS07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16199.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L3_105_000M1_scaffold_565_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11858..12568)
DNA (711bp) protein (237aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
NAD-dependent protein deacylase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAI4_9BACT
NAD-dependent protein deacetylase, SIR2 family
L3_105_000M1_scaffold_565_15
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12663..14255)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003671F1A
Uncharacterized protein {ECO:0000313|EMBL:KKB46401.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
glycosyl hydrolase family 32
L3_105_000M1_scaffold_565_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14363..16120)
DNA (1758bp) protein (586aa)
Aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H881_9BACT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EHB92276.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_565_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16231..16671
DNA (441bp) protein (147aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H882_9BACT
cytidine and deoxycytidylate deaminase zinc-binding region
L3_105_000M1_scaffold_565_18
unknown

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17007..17801
DNA (795bp) protein (265aa)

This feature has no annotations

L3_105_000M1_scaffold_565_19
unknown

Not on your lists

17820..18083
DNA (264bp) protein (88aa)

This feature has no annotations

L3_105_000M1_scaffold_565_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18263..19324
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037ECD8D
helix-turn-helix domain protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
L3_105_000M1_scaffold_565_21
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19384..20145)
DNA (762bp) protein (254aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z5F8_ODOSD
peptidase M15D vanX D-ala-D-ala dipeptidase
L3_105_000M1_scaffold_565_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20284..21981)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030489E4
TonB-dependent receptor {ECO:0000313|EMBL:EFR58964.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
tonb family protein
L3_105_000M1_scaffold_565_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22034..22444)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H575_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93314.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
transcriptional repressor, CopY family
L3_105_000M1_scaffold_565_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22697..23185
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F60BBF
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDN87379.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
protein tyrosine phosphatase
L3_105_000M1_scaffold_565_25
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23212..23763)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H877_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92272.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
NADPH-dependent FMN reductase
L3_105_000M1_scaffold_565_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24285..24824
DNA (540bp) protein (180aa)
Ser/Thr phosphatase family protein n=3 Tax=Bacteroidales RepID=D0TER0_9BACE
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEY83785.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_000M1_scaffold_565_27
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24972..26189
DNA (1218bp) protein (406aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-N-acetyl-D-mannosamine dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E04B17
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:KKB54539.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
L3_105_000M1_scaffold_565_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26143..27339
DNA (1197bp) protein (399aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E54FA8
UDP-GlcNAc 2-epimerase
Putative UDP-GlcNAc 2-epimerase {ECO:0000313|EMBL:ABR43332.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_000M1_scaffold_565_29
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27556..28965
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DE9B76
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDA93309.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
L3_105_000M1_scaffold_565_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28976..30187
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ECBDC6
Uncharacterized protein {ECO:0000313|EMBL:EHB93443.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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