ggKbase home page

L3_105_000M1_scaffold_594

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_594_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

3..431
DNA (429bp) protein (143aa)
D-lactate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MNJ6_9FIRM
D-lactate dehydrogenase {ECO:0000313|EMBL:CDB87362.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
lactate dehydrogenase-like oxidoreductase
L3_105_000M1_scaffold_594_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(481..1767)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39857.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
O-Antigen ligase.
L3_105_000M1_scaffold_594_3
unknown

Not on your lists

comp(1764..3296)
DNA (1533bp) protein (511aa)

This feature has no annotations

L3_105_000M1_scaffold_594_4
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3310..6681)
DNA (3372bp) protein (1124aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AR08_9CLOT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDD60815.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Ig domain-containing protein
L3_105_000M1_scaffold_594_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(6996..7790)
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=2 Tax=root RepID=R5IM13_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY41354.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC transporter ATP-binding protein
L3_105_000M1_scaffold_594_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(7783..8712)
DNA (930bp) protein (310aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXA6_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCY41351.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC-type uncharacterized transport system, permease component
L3_105_000M1_scaffold_594_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(8844..9839)
DNA (996bp) protein (332aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGZ0_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CCY41350.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC-type uncharacterized transport system, periplasmic component
L3_105_000M1_scaffold_594_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(9945..10061)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IM09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41349.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_105_000M1_scaffold_594_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(10219..11445)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXA1_9FIRM
L3_105_000M1_scaffold_594_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(11484..12005)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IM05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41344.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_105_000M1_scaffold_594_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(12382..12681)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41342.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_105_000M1_scaffold_594_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(13008..14228)
DNA (1221bp) protein (407aa)
S-layer domain-containing protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGX9_9FIRM
S-layer domain-containing protein {ECO:0000313|EMBL:CCY41340.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
S-layer domain-containing protein
L3_105_000M1_scaffold_594_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(14215..15903)
DNA (1689bp) protein (563aa)
DNA repair protein RecN n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX27_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
recN; DNA repair protein RecN
L3_105_000M1_scaffold_594_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(15931..16386)
DNA (456bp) protein (152aa)
Arginine repressor n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGX3_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
argR; arginine repressor
L3_105_000M1_scaffold_594_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(16395..17261)
DNA (867bp) protein (289aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILZ4_9FIRM
L3_105_000M1_scaffold_594_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17270..18079)
DNA (810bp) protein (270aa)
Hemolysin TlyA family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGR4_9FIRM
Hemolysin TlyA family protein {ECO:0000313|EMBL:CCY41333.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hemolysin TlyA family protein
L3_105_000M1_scaffold_594_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(18079..19914)
DNA (1836bp) protein (612aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGW6_9FIRM
L3_105_000M1_scaffold_594_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(19924..20517)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41325.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_105_000M1_scaffold_594_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(21341..22210)
DNA (870bp) protein (290aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX09_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CCY41322.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_105_000M1_scaffold_594_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(22203..22436)
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX74_9FIRM
L3_105_000M1_scaffold_594_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(22429..23646)
DNA (1218bp) protein (406aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGV8_9FIRM
L3_105_000M1_scaffold_594_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists


comp(23646..24569)
DNA (924bp) protein (308aa)
Metallohydrolase glycoprotease/Kae1 family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILX8_9FIRM
Metallohydrolase glycoprotease/Kae1 family {ECO:0000313|EMBL:CCY41319.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
peptidase M22 glycoprotease
L3_105_000M1_scaffold_594_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(24563..25015)
DNA (453bp) protein (151aa)
N utilization substance protein B homolog n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGP7_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
nusB; antitermination protein NusB
L3_105_000M1_scaffold_594_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(25091..25474)
DNA (384bp) protein (128aa)
Alkaline shock protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX03_9FIRM
Alkaline shock protein {ECO:0000313|EMBL:CCY41317.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_105_000M1_scaffold_594_25
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(25581..26153)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41316.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
spoIIIAH; putative stage III sporulation protein AH
L3_105_000M1_scaffold_594_26
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(26165..26704)
DNA (540bp) protein (180aa)
Stage III sporulation protein AG n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILX3_9FIRM
Stage III sporulation protein AG {ECO:0000313|EMBL:CCY41314.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
spoIIIAG; putative stage III sporulation protein AG
L3_105_000M1_scaffold_594_27
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(26692..27168)
DNA (477bp) protein (159aa)
Putative stage III sporulation protein AF n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IGP2_9FIRM
Putative stage III sporulation protein AF {ECO:0000313|EMBL:CCY41313.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
spoIIIAF; putative stage III sporulation protein AF
L3_105_000M1_scaffold_594_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(27168..28262)
DNA (1095bp) protein (365aa)
Stage III sporulation protein AE n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX65_9FIRM
Stage III sporulation protein AE {ECO:0000313|EMBL:CCY41311.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
spoIIIAE; putative stage III sporulation protein AE
L3_105_000M1_scaffold_594_29
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(28264..28656)
DNA (393bp) protein (131aa)
Putative sporulation protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILW8_9FIRM
Putative sporulation protein {ECO:0000313|EMBL:CCY41309.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sporulation protein
L3_105_000M1_scaffold_594_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(28656..28850)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWZ2_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:CCY41307.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
stage III sporulation protein AC
Displaying items 1-30 of 57 in total

View Taxonomy