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L3_105_000M1_scaffold_644

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_644_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1803
DNA (1803bp) protein (601aa)
Tex-like protein n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2PVH0_9FIRM
Tex-like protein {ECO:0000313|EMBL:ERK59275.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative transcription accessory protein
L3_105_000M1_scaffold_644_2
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1889..2923)
DNA (1035bp) protein (345aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA51_9FIRM
L3_105_000M1_scaffold_644_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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3403..4083
DNA (681bp) protein (227aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SKF9_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CCZ45427.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_644_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4225..4698
DNA (474bp) protein (158aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEY2_9CLOT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCX49966.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sigma-70 family RNA polymerase sigma factor
L3_105_000M1_scaffold_644_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4695..5390
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B305_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49965.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_644_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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5560..6210
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SFK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45531.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_644_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6213..7604
DNA (1392bp) protein (464aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3V4_9CLOT
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:CCX49963.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
membrane bound O-acyl transferase MBOAT family protein
L3_105_000M1_scaffold_644_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7615..8703
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49962.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_644_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9200..10555
DNA (1356bp) protein (452aa)
Putative sodium/glutamate symporter n=2 Tax=Clostridium symbiosum RepID=U2D269_CLOSY
Putative sodium/glutamate symporter {ECO:0000313|EMBL:ERI75577.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sodium/glutamate symporter
L3_105_000M1_scaffold_644_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10619..11737
DNA (1119bp) protein (373aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=2 Tax=Clostridium RepID=U2BVH1_CLOSY
Ornithine cyclodeaminase {ECO:0000313|EMBL:ERI75808.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_105_000M1_scaffold_644_11
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11836..12705)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LR81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61285.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
transcriptional regulator
L3_105_000M1_scaffold_644_12
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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12820..14256
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UUP2_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44915.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L3_105_000M1_scaffold_644_13
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14399..14794
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PU03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19673.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_105_000M1_scaffold_644_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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14998..16386
DNA (1389bp) protein (463aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S455_9FIRM
mnmE; tRNA modification GTPase MnmE
L3_105_000M1_scaffold_644_15
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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16547..19048
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86807.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ATP-dependent transcriptional regulator-like protein
L3_105_000M1_scaffold_644_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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19185..19430
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86806.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_105_000M1_scaffold_644_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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19466..20227
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45985.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_644_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20262..21350
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S031_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14176.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_105_000M1_scaffold_644_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21367..22296
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S035_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14180.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_105_000M1_scaffold_644_20
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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22325..23245
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44028.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_105_000M1_scaffold_644_21
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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23260..24138
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWV6_9FIRM
Protein of unknown function (DUF3137).
Uncharacterized protein {ECO:0000313|EMBL:CCX70999.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L3_105_000M1_scaffold_644_22
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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24155..24343
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86796.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_105_000M1_scaffold_644_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24436..25674)
DNA (1239bp) protein (413aa)
NCS1 nucleoside transporter family protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSN3_9FIRM
NCS1 nucleoside transporter family protein {ECO:0000313|EMBL:CCY32750.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Purine-cytosine permease and related proteins
L3_105_000M1_scaffold_644_24
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25705..26802)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HX71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32749.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_105_000M1_scaffold_644_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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27706..28629
DNA (924bp) protein (308aa)
ATPase family n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZJ8_9FIRM
ATPase family {ECO:0000313|EMBL:CCZ46660.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
AAA domain (dynein-related subfamily).
L3_105_000M1_scaffold_644_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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28631..30382
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SIW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46661.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_644_27
unknown

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comp(30372..30476)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_105_000M1_scaffold_644_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30516..30986)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15396.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
CAAX amino terminal protease family.
L3_105_000M1_scaffold_644_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(31819..32340)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S091_9FIRM
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_644_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(32352..32816)
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SPN5_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
smpB; SsrA-binding protein
Displaying items 1-30 of 43 in total

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