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L3_105_000M1_scaffold_852

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_852_1
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..433
DNA (432bp) protein (144aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JCN6_9FIRM
L3_105_000M1_scaffold_852_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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492..1964
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=4 Tax=Clostridiales RepID=E5XET7_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CCZ26201.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
stage IV sporulation protein A
L3_105_000M1_scaffold_852_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2039..2881
DNA (843bp) protein (281aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=5 Tax=Clostridiales RepID=A5KQ64_9FIRM
L3_105_000M1_scaffold_852_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2892..4211
DNA (1320bp) protein (440aa)
Amidohydrolase family protein n=5 Tax=Clostridiales RepID=A5KQ63_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:CCZ26199.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Cytosine deaminase and related metal-dependent hydrolases
L3_105_000M1_scaffold_852_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4309..4773
DNA (465bp) protein (155aa)
Molybdopterin binding domain protein n=3 Tax=Clostridiales RepID=A5KQ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26198.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Molybdopterin biosynthesis enzymes
L3_105_000M1_scaffold_852_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4770..5471
DNA (702bp) protein (234aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84335.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_105_000M1_scaffold_852_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5462..5941
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=5 Tax=Clostridiales RepID=A5KQ60_9FIRM
L3_105_000M1_scaffold_852_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6420..7451
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=5 Tax=Clostridiales RepID=A5KQ59_9FIRM
L3_105_000M1_scaffold_852_9
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7603..8046)
DNA (444bp) protein (148aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=3 Tax=Clostridiales RepID=A5KQ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84338.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Aspartate carbamoyltransferase, regulatory subunit
L3_105_000M1_scaffold_852_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8068..8988)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=4 Tax=Clostridiales RepID=E5XES9_9FIRM
L3_105_000M1_scaffold_852_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9357..10487
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=3 Tax=Clostridiales RepID=A5KQ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26192.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_105_000M1_scaffold_852_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10583..11875
DNA (1293bp) protein (431aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ54_9FIRM
ATPase with chaperone activity {ECO:0000313|EMBL:EFV20266.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted ATPase (AAA+ superfamily)
L3_105_000M1_scaffold_852_13
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11987..13729)
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84342.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L3_105_000M1_scaffold_852_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13959..14837
DNA (879bp) protein (293aa)
TIGR00255 family protein n=5 Tax=Clostridiales RepID=A5KQ52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26189.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
conserved hypothetical protein TIGR00255
L3_105_000M1_scaffold_852_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14849..15484
DNA (636bp) protein (212aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=5 Tax=Clostridiales RepID=E5XES4_9FIRM
L3_105_000M1_scaffold_852_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15487..15735
DNA (249bp) protein (83aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=5 Tax=Clostridiales RepID=E5XES3_9FIRM
L3_105_000M1_scaffold_852_17
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15854..16906
DNA (1053bp) protein (351aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AW18_9FIRM
L3_105_000M1_scaffold_852_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16934..17176
DNA (243bp) protein (81aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AW18_9FIRM
L3_105_000M1_scaffold_852_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17173..17715
DNA (543bp) protein (181aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=5 Tax=Clostridiales RepID=A5KQ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20260.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000M1_scaffold_852_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17718..18233
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QIN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26184.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
competence/damage-inducible protein CinA C-terminal domain
L3_105_000M1_scaffold_852_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18428..19120
DNA (693bp) protein (231aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26183.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000M1_scaffold_852_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19169..20179
DNA (1011bp) protein (337aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=A5KQ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23386.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_105_000M1_scaffold_852_23
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20381..20779
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QVF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84444.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_105_000M1_scaffold_852_24
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20911..21633)
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QBV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84445.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_105_000M1_scaffold_852_25
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21635..22495)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AWB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84446.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
putative ABC transport system ATP-binding protein
L3_105_000M1_scaffold_852_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22476..22859)
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=A5KQB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26178.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
GntR family transcriptional regulator
L3_105_000M1_scaffold_852_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23037..24053
DNA (1017bp) protein (339aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Clostridiales RepID=A5KLP9_9FIRM
SPFH domain/Band 7 family protein {ECO:0000313|EMBL:CCZ26177.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_105_000M1_scaffold_852_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24050..24259
DNA (210bp) protein (70aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26176.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000M1_scaffold_852_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24482..24712
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24885.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_105_000M1_scaffold_852_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24818..25774
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A5KLP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84451.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Displaying items 1-30 of 43 in total

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