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L3_105_000M1_scaffold_949

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_949_1
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..4344
DNA (4344bp) protein (1448aa)
Ig-like domain-containing surface protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K767_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE70857.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Ig-like domain-containing surface protein
L3_105_000M1_scaffold_949_2
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4434..5537
DNA (1104bp) protein (368aa)
Hypothetical membrane protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4P8_9FIRM
Hypothetical membrane protein {ECO:0000313|EMBL:CDE70856.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_105_000M1_scaffold_949_3
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5657..7597
DNA (1941bp) protein (647aa)
N-terminal double-transmembrane domain-containing protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3I7_9FIRM
N-terminal double-transmembrane domain-containing protein {ECO:0000313|EMBL:CDE70855.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_105_000M1_scaffold_949_4
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7614..10370
DNA (2757bp) protein (919aa)
von Willebrand factor type A n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3Q6_9FIRM
von Willebrand factor type A {ECO:0000313|EMBL:CDE70854.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
von Willebrand factor type A domain protein
L3_105_000M1_scaffold_949_5
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10367..13162
DNA (2796bp) protein (932aa)
Ig-like domain-containing surface protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4S8_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE70853.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
cell surface protein
L3_105_000M1_scaffold_949_6
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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13201..18258
DNA (5058bp) protein (1686aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K765_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70852.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_105_000M1_scaffold_949_7
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18300..19289
DNA (990bp) protein (330aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7H5_9FIRM
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:CDE71007.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
nirQ; Denitrification regulatory protein NirQ
L3_105_000M1_scaffold_949_8
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19311..20210
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K546_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71006.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_105_000M1_scaffold_949_9
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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20217..22166
DNA (1950bp) protein (650aa)
von Willebrand factor type A n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7C4_9FIRM
von Willebrand factor type A {ECO:0000313|EMBL:CDE70937.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_105_000M1_scaffold_949_10
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22180..25101
DNA (2922bp) protein (974aa)
von Willebrand factor type A n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4X3_9FIRM
von Willebrand factor type A {ECO:0000313|EMBL:CDE70936.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
von Willebrand factor type A domain protein
L3_105_000M1_scaffold_949_11
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25129..28074
DNA (2946bp) protein (982aa)
Ig-like domain-containing surface protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3R5_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE70935.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
cell surface protein
L3_105_000M1_scaffold_949_12
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28251..33341
DNA (5091bp) protein (1697aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70934.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein with 22 Listeria/Bacterioides repeats
L3_105_000M1_scaffold_949_13
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33928..34413)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K500_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70933.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_105_000M1_scaffold_949_14
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34549..36204
DNA (1656bp) protein (552aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7C1_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit {ECO:0000313|EMBL:CDE70932.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
phosphomannomutase
L3_105_000M1_scaffold_949_15
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


36259..37497
DNA (1239bp) protein (413aa)
Histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4W8_9FIRM
Histidine--tRNA ligase {ECO:0000313|EMBL:CDE70931.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_105_000M1_scaffold_949_16
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37499..40264
DNA (2766bp) protein (922aa)
Cation-transporting ATPase P-type n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3R1_9FIRM
Cation-transporting ATPase P-type {ECO:0000313|EMBL:CDE70930.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
H+ transporting ATPase, P-type ATPase
L3_105_000M1_scaffold_949_17
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40261..40992
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70929.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
fabG; 3-ketoacyl-ACP reductase
L3_105_000M1_scaffold_949_18
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41024..42709
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70928.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
oligoendopeptidase, M3 family
L3_105_000M1_scaffold_949_19
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42719..43882
DNA (1164bp) protein (388aa)
Membrane protein putative toxin regulator-like protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7B8_9FIRM
Membrane protein putative toxin regulator-like protein {ECO:0000313|EMBL:CDE70927.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_105_000M1_scaffold_949_20
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43928..44671
DNA (744bp) protein (248aa)
Metallophosphoesterase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4W2_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDE70926.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
serine/threonine protein phosphatase
L3_105_000M1_scaffold_949_21
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44705..44929)
DNA (225bp) protein (75aa)
HTH-type transcriptional regulator AnsR family protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3Q8_9FIRM
HTH-type transcriptional regulator AnsR family protein {ECO:0000313|EMBL:CDE70925.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
HTH/TPR domain-containing protein
L3_105_000M1_scaffold_949_22
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45053..47356)
DNA (2304bp) protein (768aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70924.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_105_000M1_scaffold_949_23
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47540..49342
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
Elongation factor 4 n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4Z0_9FIRM
LepA; GTP-binding protein LepA
L3_105_000M1_scaffold_949_24
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49349..50488
DNA (1140bp) protein (380aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7B3_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDE70922.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
oxygen-independent coproporphyrinogen III oxidase
L3_105_000M1_scaffold_949_25
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50778..56240
DNA (5463bp) protein (1821aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70921.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
extracellular solute-binding protein
Displaying 25 items

View Taxonomy