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L3_105_000M1_scaffold_989

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_989_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..644)
DNA (642bp) protein (214aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
30S ribosomal protein S12 (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y268_9BACT
L3_105_000M1_scaffold_989_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(777..1619)
DNA (843bp) protein (281aa)
Putative lipoprotein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUM1_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CDD25365.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_989_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1650..2498)
DNA (849bp) protein (283aa)
Metal-dependent hydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9P5_9BACT
Metal-dependent hydrolase {ECO:0000313|EMBL:CDD25366.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
metal-dependent hydrolase
L3_105_000M1_scaffold_989_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2524..4134)
DNA (1611bp) protein (537aa)
RagB/SusD domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4D7_9BACT
RagB/SusD domain protein {ECO:0000313|EMBL:CDD25367.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RagB/SusD family protein
L3_105_000M1_scaffold_989_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4156..7350)
DNA (3195bp) protein (1065aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNX1_9BACT
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD25368.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SusC/RagA family TonB-linked outer membrane protein
L3_105_000M1_scaffold_989_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7802..8806)
DNA (1005bp) protein (335aa)
cell division protein FtsY n=1 Tax=Alistipes onderdonkii RepID=UPI00036B6A29
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
signal recognition particle-docking protein FtsY
L3_105_000M1_scaffold_989_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8888..9805
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035CFDC0
Uncharacterized protein {ECO:0000313|EMBL:EFR58798.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_105_000M1_scaffold_989_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9885..10043)
DNA (159bp) protein (53aa)
Uncharacterized protein n=4 Tax=Alistipes RepID=I3YMV9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78327.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_989_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10056..10238)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNX6_9BACT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
50S ribosomal protein L33
L3_105_000M1_scaffold_989_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10255..10488)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=4 Tax=Alistipes RepID=I3YMW1_ALIFI
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_989_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10617..12536)
DNA (1920bp) protein (640aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Signal transduction histidine kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUN2_9BACT
signal transduction histidine kinase
L3_105_000M1_scaffold_989_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12612..13157)
DNA (546bp) protein (182aa)
Competence/damage-inducible protein CinA-like protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9Q4_9BACT
Competence/damage-inducible protein CinA-like protein {ECO:0000313|EMBL:CDD25376.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
competence/damage-inducible protein CinA-like protein
L3_105_000M1_scaffold_989_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13170..14411)
DNA (1242bp) protein (414aa)
CinA-like protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4F1_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
competence/damage-inducible protein CinA-like protein
L3_105_000M1_scaffold_989_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14427..15743)
DNA (1317bp) protein (439aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNY1_9BACT
L3_105_000M1_scaffold_989_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15798..16793)
DNA (996bp) protein (332aa)
phosphoglycerate dehydrogenase-like oxidoreductase (EC:1.1.1.290)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y282_9BACT
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:CDD25379.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_989_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16948..18003
DNA (1056bp) protein (352aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family (EC:3.5.3.11)
Arginase/agmatinase/formimionoglutamate hydrolase arginase family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUN7_9BACT
Arginase/agmatinase/formimionoglutamate hydrolase arginase family {ECO:0000313|EMBL:CDD25380.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_989_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18019..19383
DNA (1365bp) protein (455aa)
sodium:proton antiporter n=1 Tax=Alistipes onderdonkii RepID=UPI0003741F52
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
sodium/proton antiporter, NhaA family
L3_105_000M1_scaffold_989_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19419..20102
DNA (684bp) protein (228aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4F6_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_989_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20192..21319
DNA (1128bp) protein (376aa)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Alistipes onderdonkii RepID=UPI00037CFF70
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_105_000M1_scaffold_989_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21379..21858)
DNA (480bp) protein (160aa)
Acetyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y286_9BACT
Acetyltransferase {ECO:0000313|EMBL:CDD25384.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase
L3_105_000M1_scaffold_989_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21928..22290)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R6XUP0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25385.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_989_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22873..25653
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9R2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25386.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
alpha-L-rhamnosidase
L3_105_000M1_scaffold_989_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26110..26664
DNA (555bp) protein (185aa)
Cupin domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4G2_9BACT
Cupin domain protein {ECO:0000313|EMBL:CDD25387.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L3_105_000M1_scaffold_989_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26669..28327
DNA (1659bp) protein (553aa)
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases (EC:6.2.1.1)
AMP-binding enzyme n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNY9_9BACT
AMP-binding enzyme {ECO:0000313|EMBL:CDD25388.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_105_000M1_scaffold_989_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28801..29067
DNA (267bp) protein (89aa)
50S ribosomal protein L31 n=2 Tax=Alistipes RepID=I3YMX4_ALIFI
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|RuleBase:RU000564}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_105_000M1_scaffold_989_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29268..30131
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y290_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25389.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_989_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30529..31434
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUP5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25390.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_989_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31544..32068)
DNA (525bp) protein (175aa)
Acetyltransferase ribosomal protein N-acetylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9R6_9BACT
Acetyltransferase ribosomal protein N-acetylase {ECO:0000313|EMBL:CDD25391.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
acetyltransferase, ribosomal protein N-acetylase
L3_105_000M1_scaffold_989_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32982..34169
DNA (1188bp) protein (396aa)
elongation factor Tu n=1 Tax=Alistipes onderdonkii RepID=UPI0003795D12
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_105_000M1_scaffold_989_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34309..34506
DNA (198bp) protein (66aa)
Preprotein translocase SecE subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y3H7_9BACT
Preprotein translocase SecE subunit {ECO:0000313|EMBL:CDD25879.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Preprotein translocase subunit SecE
Displaying items 1-30 of 32 in total

View Taxonomy