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L3_105_000M1_scaffold_9120

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_9120_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..360
DNA (360bp) protein (120aa)
Glycosyl hydrolase family 25 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0W6_9FIRM
endolysin (Glycoside Hydrolase Family 25 protein )
Endolysin (Glycoside Hydrolase Family 25 protein ) {ECO:0000313|EMBL:CCO06275.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_105_000M1_scaffold_9120_2
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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378..1124
DNA (747bp) protein (249aa)
dam; DNA adenine methylase (EC:2.1.1.72)
Putative DNA methylase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LIS5_ACEWD
DNA methylase {ECO:0000313|EMBL:EYE88249.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
L3_105_000M1_scaffold_9120_3
unknown

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1369..1581
DNA (213bp) protein (71aa)

This feature has no annotations

L3_105_000M1_scaffold_9120_4
unknown

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1581..1799
DNA (219bp) protein (73aa)

This feature has no annotations

L3_105_000M1_scaffold_9120_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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1837..2598
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GUV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29243.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_105_000M1_scaffold_9120_6
unknown

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comp(2658..2804)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_105_000M1_scaffold_9120_7

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comp(2824..4155)
DNA (1332bp) protein (444aa)
signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3746D
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:EKC62333.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_105_000M1_scaffold_9120_8
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4158..4868)
DNA (711bp) protein (237aa)
Sensory transduction protein LytT n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B211_CLOA9
lytT; sensory transduction protein LytT
Sensory transduction protein LytT {ECO:0000313|EMBL:AFS78960.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_105_000M1_scaffold_9120_9
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4865..6172)
DNA (1308bp) protein (436aa)
Integrase family protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GT02_9FIRM
Integrase family protein {ECO:0000313|EMBL:CCY20500.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Phage integrase
L3_105_000M1_scaffold_9120_10
unknown

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comp(6404..6838)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_105_000M1_scaffold_9120_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6828..7247)
DNA (420bp) protein (140aa)
tRNA_anti-like family protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISC6_9CLOT
tRNA_anti-like family protein {ECO:0000313|EMBL:CDB52145.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L3_105_000M1_scaffold_9120_12
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7390..7713)
DNA (324bp) protein (108aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Bacillus thuringiensis YBT-1518 RepID=V5ML43_BACTU
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP25367.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. morrisoni.;"
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
L3_105_000M1_scaffold_9120_13
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7847..8086
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XZB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD11532.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
helix-turn-helix domain-containing protein
Displaying 13 items

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