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L3_105_000M1_scaffold_8979

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_8979_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(65..640)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00035DA081
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG95308.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
putative DNA-binding protein
L3_105_000M1_scaffold_8979_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(774..1163)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L144_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13334.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_105_000M1_scaffold_8979_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(1251..2399)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28006.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
membrane protein
L3_105_000M1_scaffold_8979_4
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2402..3094)
DNA (693bp) protein (231aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IT49_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS25028.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_105_000M1_scaffold_8979_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3070..3795)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67145.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_105_000M1_scaffold_8979_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3912..4172)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67146.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_105_000M1_scaffold_8979_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4346..5596
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=4 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22978.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transposase IS116/IS110/IS902 family./Transposase.
L3_105_000M1_scaffold_8979_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6077..6367)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_000M1_scaffold_8979_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6345..6638)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82078.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_000M1_scaffold_8979_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6753..7151)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82080.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_000M1_scaffold_8979_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7148..9553)
DNA (2406bp) protein (802aa)
TnpX site-specific recombinase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE6_9CLOT
TnpX site-specific recombinase {ECO:0000313|EMBL:EEA82081.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_8979_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9619..10053)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67161.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Type IV secretory pathway, VirD4 components
L3_105_000M1_scaffold_8979_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10107..10787)
DNA (681bp) protein (227aa)
Sortase family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPE3_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDB26295.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
LPXTG-site transpeptidase (sortase) family protein
L3_105_000M1_scaffold_8979_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10780..11598)
DNA (819bp) protein (273aa)
Sortase family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GYH0_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDB26296.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
LPXTG-site transpeptidase (sortase) family protein
L3_105_000M1_scaffold_8979_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11595..13430)
DNA (1836bp) protein (612aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJW8_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDB26297.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_105_000M1_scaffold_8979_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13427..14536)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26298.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
Displaying 16 items

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