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L3_105_000M1_scaffold_21881

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_21881_1
unknown

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comp(1..171)
DNA (171bp) protein (57aa)

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L3_105_000M1_scaffold_21881_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(122..949)
DNA (828bp) protein (276aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IB86_9FIRM
tRNA pseudouridine synthase A
L3_105_000M1_scaffold_21881_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(969..1784)
DNA (816bp) protein (272aa)
Cobalt transport protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MX59_9CLOT
Cobalt transport protein {ECO:0000313|EMBL:CDC04323.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_105_000M1_scaffold_21881_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1774..2430)
DNA (657bp) protein (219aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ecfA1; Energy-coupling factor transporter ATP-binding protein EcfA 1 (EC:3.6.3.-)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EY01_CLOS4
Displaying 4 items

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