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L3_105_000M1_scaffold_3061

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3061_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036EDBEF
signal transduction histidine kinase
L3_105_000M1_scaffold_3061_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(626..3079)
DNA (2454bp) protein (818aa)
ATP-dependent Clp protease ClpC n=1 Tax=Alistipes onderdonkii RepID=UPI000363420C
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFR56771.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
chaperone ATPase
L3_105_000M1_scaffold_3061_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3701..7267
DNA (3567bp) protein (1189aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B38AC
Uncharacterized protein {ECO:0000313|EMBL:KKB57078.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_105_000M1_scaffold_3061_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7571..8065)
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Phosphoesterase MJ0936 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ92_9BACT
phosphoesterase
L3_105_000M1_scaffold_3061_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8141..9415)
DNA (1275bp) protein (425aa)
Recombination factor protein RarA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRV1_9BACT
Recombination factor protein RarA {ECO:0000313|EMBL:CDD24380.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
AAA ATPase
L3_105_000M1_scaffold_3061_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9546..11300)
DNA (1755bp) protein (585aa)
Aspartate--tRNA ligase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6U7_9BACT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD24381.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartyl-tRNA synthetase
L3_105_000M1_scaffold_3061_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12045..13004
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037FC55E
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD24383.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_3061_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13263..14183)
DNA (921bp) protein (307aa)
(Fe-S)-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036C5A1C
Uncharacterized Fe-S protein {ECO:0000313|EMBL:CDD24386.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_3061_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14283..15962
DNA (1680bp) protein (560aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1P2_9BACT
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:CDD24387.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
AMP-forming long-chain acyl-CoA synthetase
L3_105_000M1_scaffold_3061_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15993..16283)
DNA (291bp) protein (97aa)
Transcription regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL63_9BACT
Transcription regulator {ECO:0000313|EMBL:CDD24388.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcription regulator
Displaying 10 items

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