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L3_105_000M1_scaffold_155_10

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: 13425..14351

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 297.0
  • Bit_score: 461
  • Evalue 6.70e-127
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 300.0
  • Bit_score: 296
  • Evalue 5.70e-78
Pseudouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM58_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 297.0
  • Bit_score: 461
  • Evalue 4.70e-127

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 927
GTGACCGTTTTGCGATATACTGTGCCGCCGGAGAACGAGGGCTGCAAGCTGGGGCTGTTCCTGCGAATGCAGGGCGTCACGGCAGGGCTGATCAAGTCCGTCAAGCACGACGGCAGCGGCTTTTTTGCCGATGATGCCCCCCTGCACACCAACCAGCCGGTCCACGCCGGGCAGTGTATTTCCTTTGCGCTGCCACCGGAACATGACACATCGGTGACGCCGCAGCCGGTACCGTTTTCCATCGCCTATGAAGATGAATTTGCCGCAGTGCTTAACAAGCCTGCGGGCATCGCCGTACACCCCACGCTGAACTACCCGGATGGCACGCTGGCCAACGGCTGGATGTACCATCTGCAGCAGGAGGGGTGCACCGGCATTTTCCGCCCGGTCAACCGCATTGACAAAAACACCAGCGGTCTTGTGCTCTGCGCCCAGAACGCCTTTGCCGCACCGTTGCTGGCCGCTTCGGCCCACAAGTGCTACCTTGCCATTGTGCAGGGGGCAATGCCATTGGGCCGCGGCAGGGTAGAGGCCCCTATTGCGCGGCGGGGTGATTCCATCATTGGCCGCTGCGTGCGGGAGGACGGCAAGTACAGCCTGACGGAATATCAGGTGCTGGCCGTGGGCCGCAGCCACAGTTTGGTGGCCTGCTGGCTCTGCACCGGGCGCACTCACCAGATCCGCGTCCATATGGCGTATATCGGCCACCCGCTGGCGGGGGACACCCTCTACGGCGGCTCGGATACAGTCATTGCCCGCCACGCACTGCATTGCGCCATCCTGCATTTTGCCCACCCGCTGACAGGCAAGCCTATCCGGGTCGAGTGCCCGCTGCCCGCCGGCATGGCCGCCCTGGCCGAGACTGAAAACCTGCTGGACGGCTGGCAACTGAGCAGTCTGCCCTGCGGCGAAGATGCACTTACTTAA
PROTEIN sequence
Length: 309
VTVLRYTVPPENEGCKLGLFLRMQGVTAGLIKSVKHDGSGFFADDAPLHTNQPVHAGQCISFALPPEHDTSVTPQPVPFSIAYEDEFAAVLNKPAGIAVHPTLNYPDGTLANGWMYHLQQEGCTGIFRPVNRIDKNTSGLVLCAQNAFAAPLLAASAHKCYLAIVQGAMPLGRGRVEAPIARRGDSIIGRCVREDGKYSLTEYQVLAVGRSHSLVACWLCTGRTHQIRVHMAYIGHPLAGDTLYGGSDTVIARHALHCAILHFAHPLTGKPIRVECPLPAGMAALAETENLLDGWQLSSLPCGEDALT*