ggKbase home page

L3_105_000M1_scaffold_158_22

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: 23907..24488

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Parabacteroides RepID=N2B714_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 188.0
  • Bit_score: 181
  • Evalue 7.80e-43
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB55039.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 188
  • Evalue 5.20e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 180.0
  • Bit_score: 165
  • Evalue 9.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides gordonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGACAGCCGTTAAAAAGAAACGGAGACTCGACTCCCGAAGCGACCTGCCGCTGGTCTACGATCAGTACAAGCCGGAGCTCGAAGGGTATATCCGACGTAGGGTGGACTCGACGGAAGATACGGAAGACATCCTCCAGGACGTTTTCTACAAACTGACGAAAACGGATCTGCAGGAGAATCCCATCGAATACCTGTCGGCCTGGCTCTACCAAGCGGTTACAAACCGCATCATCGACCGCCGGCGAAAGAAACGGGAGCAGGCGCTACCCGAAACCCGGCAGGAAAACGAGGACGACTATTTCCTCGACTCGCTGTCGGACTTCCTGGCCGACGACGGGAACGATCCGGAGATCATGTTCCGCAACGAACTGATCCGGGAAGAGATCGAAGTGGCGCTGTCGGAGCTTCCGCCCGAGCAACGTTCGGTATTCGAACTCACCGAATACGACGGGATTCCCTACAAAGAGATCGCCGAAACGACCGGGGTTCCCGTTCCCACGCTGTTGTCGCGGAAACACTACGCGATCGGCCTCCTCCGCAAAAGGCTACAACAGTTTTACCGGGAAATCGTCCCCCGATAG
PROTEIN sequence
Length: 194
MTAVKKKRRLDSRSDLPLVYDQYKPELEGYIRRRVDSTEDTEDILQDVFYKLTKTDLQENPIEYLSAWLYQAVTNRIIDRRRKKREQALPETRQENEDDYFLDSLSDFLADDGNDPEIMFRNELIREEIEVALSELPPEQRSVFELTEYDGIPYKEIAETTGVPVPTLLSRKHYAIGLLRKRLQQFYREIVPR*