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L3_105_000M1_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_158_1
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(913..2652)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CLB4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM90594.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
L3_105_000M1_scaffold_158_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3319..4509
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036B10B2
Uncharacterized protein {ECO:0000313|EMBL:EOS17139.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_000M1_scaffold_158_3
unknown

Not on your lists

4469..5143
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036A8C34
L3_105_000M1_scaffold_158_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5267..6328)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8P4_9BACT
L3_105_000M1_scaffold_158_5
unknown

Not on your lists

comp(6403..6774)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_105_000M1_scaffold_158_6
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6780..7853)
DNA (1074bp) protein (358aa)
Peptidase M10A and M12B matrixin and adamalysin n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F9U7_9PORP
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:CDB08890.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
peptidase M10A and M12B matrixin and adamalysin
L3_105_000M1_scaffold_158_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7958..8740)
DNA (783bp) protein (261aa)
Acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8P3_9BACT
Acetylglutamate kinase {ECO:0000313|EMBL:EHB92438.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_158_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8751..9881)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031F0166
Uncharacterized protein {ECO:0000313|EMBL:EHB92437.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
class III aminotransferase
L3_105_000M1_scaffold_158_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9963..10940)
DNA (978bp) protein (326aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F9A7B6
L3_105_000M1_scaffold_158_10
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10966..11295)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D30AC2
Putative mebrane transport protein {ECO:0000313|EMBL:EIZ04886.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
quaternary ammonium compound-resistance protein QacE
L3_105_000M1_scaffold_158_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11298..12491)
DNA (1194bp) protein (398aa)
Argininosuccinate synthase (EC:6.3.4.5)
argininosuccinate synthase n=1 Tax=Alistipes sp. AP11 RepID=UPI00031CDE91
Uncharacterized protein {ECO:0000313|EMBL:EHB92435.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_105_000M1_scaffold_158_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12554..13156)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8N9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92434.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_105_000M1_scaffold_158_13
unknown

Not on your lists

13554..14489
DNA (936bp) protein (312aa)

This feature has no annotations

L3_105_000M1_scaffold_158_14
unknown

Not on your lists

14680..15039
DNA (360bp) protein (120aa)

This feature has no annotations

L3_105_000M1_scaffold_158_15
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15104..15685)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031DC98F
NADH peroxidase {ECO:0000313|EMBL:GAF04864.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
rbr; Rubrerythrin
L3_105_000M1_scaffold_158_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15777..16388
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H8N8_9BACT
L3_105_000M1_scaffold_158_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16530..17795)
DNA (1266bp) protein (422aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=4 Tax=root RepID=B0MVM2_9BACT
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EDS04107.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
MscS Mechanosensitive ion channel
L3_105_000M1_scaffold_158_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17838..18935)
DNA (1098bp) protein (366aa)
GTP-binding protein YchF n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAA545
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
GTP-binding protein YchF
L3_105_000M1_scaffold_158_19
Capnocytophaga ochracea, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19141..19767
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E48402
Uncharacterized protein {ECO:0000313|EMBL:EFS97048.1}; TaxID=873517 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga ochracea F0287.;"
putative glycosyltransferase
L3_105_000M1_scaffold_158_20
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20104..23193
DNA (3090bp) protein (1030aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUS7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ79663.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
FG-GAP repeat-containing protein
L3_105_000M1_scaffold_158_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23546..23920
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZ60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01349.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
L3_105_000M1_scaffold_158_22
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23907..24488
DNA (582bp) protein (194aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Parabacteroides RepID=N2B714_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB55039.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_105_000M1_scaffold_158_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24514..25683)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D4DBBC
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AHF15534.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
L3_105_000M1_scaffold_158_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25842..27917)
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000301473F
Melibiase family protein {ECO:0000313|EMBL:KDS22260.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Alpha-galactosidase
L3_105_000M1_scaffold_158_25
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27946..30015)
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D82FE6
Alpha-galactosidase {ECO:0000313|EMBL:EFI14833.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Alpha-galactosidase
L3_105_000M1_scaffold_158_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30037..31155)
DNA (1119bp) protein (373aa)
Transporter, major facilitator family protein n=4 Tax=Bacteroides RepID=C3QVS2_9BACE
Fucose permease
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFF52063.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_105_000M1_scaffold_158_27
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31232..31822)
DNA (591bp) protein (197aa)
phosphoheptose isomerase (EC:5.-.-.- 5.3.1.-)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FFF0CC
Phosphoheptose isomerase {ECO:0000313|EMBL:CCX51451.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
L3_105_000M1_scaffold_158_28
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31825..32796)
DNA (972bp) protein (324aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D8FAF2
Uncharacterized protein {ECO:0000313|EMBL:EGN07318.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_105_000M1_scaffold_158_29
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32809..35232)
DNA (2424bp) protein (808aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.25)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031717A5
Uncharacterized protein {ECO:0000313|EMBL:EGN07319.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_105_000M1_scaffold_158_30
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35260..37923)
DNA (2664bp) protein (888aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FDC8A0
Uncharacterized protein {ECO:0000313|EMBL:EGN07320.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
Displaying items 1-30 of 96 in total

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