ggKbase home page

L3_105_000M1_scaffold_910_5

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: 2884..3450

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFB77241.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EFB77241.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 188.0
  • Bit_score: 384
  • Evalue 8.20e-104
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 188.0
  • Bit_score: 345
  • Evalue 8.60e-93
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ81_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 188.0
  • Bit_score: 384
  • Evalue 5.90e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGCAAGTTTAATTTTATCAAGACTGAGATTCCTGAAGTGCAGATCATTGAGCCGACCGTCTTTGGCGACGACCGCGGCTATTTCATGGAGACCTACCAAATCGACGAGTTCGCCGCTGCCGGTATCGACAAGCCCTTCGTGCAGGACAACCAGAGCCGCTCCACCAAGGGCGTGCTGCGCGGTCTGCACTTCCAGACCAAGCACACCCAGGGCAAGCTGGTCCGTGTGACGCTGGGCGAAGTGTTTGATGTAGCCGTTGACTGCCGCCCCAACAGCGCGACCTTCGGCAAGTGGGTCGGCGTGACCCTCTCGGCCGAGAACAAGAAGATGCTCTGGATCCCCGAGGGCTTTGCCCACGGCTTTGTCGTGCTGTCTGACGTGGCCGAGTTCTGCTACAAATGCACCGACGTCTACGACCCGACTGCCGAGGGCGGCATCCCGTACGACGACCCGACCGTCAACGTGCAGTGGCCTGACTGCGGCTGTGCGCACAAGACCAGCGCCAAGGACAAGGAGCACACCCCCTTCGCCGAGCAGAAGTTCGAGTATTTTGAAAAATATTGA
PROTEIN sequence
Length: 189
MGKFNFIKTEIPEVQIIEPTVFGDDRGYFMETYQIDEFAAAGIDKPFVQDNQSRSTKGVLRGLHFQTKHTQGKLVRVTLGEVFDVAVDCRPNSATFGKWVGVTLSAENKKMLWIPEGFAHGFVVLSDVAEFCYKCTDVYDPTAEGGIPYDDPTVNVQWPDCGCAHKTSAKDKEHTPFAEQKFEYFEKY*