ggKbase home page

L3_105_000M1_scaffold_1535

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1535_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2..1078
DNA (1077bp) protein (359aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z837_9ACTN
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDA35853.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L3_105_000M1_scaffold_1535_2
Streptococcus sp. AS20, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1075..2187
DNA (1113bp) protein (371aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EUB23661.1}; EC=2.4.-.- {ECO:0000313|EMBL:EUB23661.1};; TaxID=936578 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. AS20.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF13_9PAST
glycosyltransferase
L3_105_000M1_scaffold_1535_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2189..3322
DNA (1134bp) protein (378aa)
UDP-N-Acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9M3_9ACTN
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KGI73613.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_105_000M1_scaffold_1535_4
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3319..4656
DNA (1338bp) protein (446aa)
Methyltransferase type 12 n=1 Tax=Paenibacillus lactis 154 RepID=G4HM63_9BACL
Methyltransferase type 12 {ECO:0000313|EMBL:EHB54615.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein
L3_105_000M1_scaffold_1535_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4653..6017
DNA (1365bp) protein (455aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Coprococcus RepID=A8SQR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73390.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_105_000M1_scaffold_1535_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6004..7290
DNA (1287bp) protein (429aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI73391.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_105_000M1_scaffold_1535_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7299..8378
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73392.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_105_000M1_scaffold_1535_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8371..9876
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZKN2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73393.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polysaccharide biosynthesis protein
L3_105_000M1_scaffold_1535_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9886..11100
DNA (1215bp) protein (405aa)
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2TL96_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73394.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
coenzyme F420-reducing hydrogenase subunit beta
L3_105_000M1_scaffold_1535_10
unknown

Not on your lists

11416..11979
DNA (564bp) protein (188aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_11
unknown

Not on your lists

11976..12578
DNA (603bp) protein (201aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_12
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12581..13066
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1LAI4_PSEO7
Uncharacterized protein {ECO:0000313|EMBL:ERG33470.1}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida JCM 20779.;"
hypothetical protein
L3_105_000M1_scaffold_1535_13
unknown

Not on your lists

13084..13635
DNA (552bp) protein (184aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_14
unknown

Not on your lists

13821..14603
DNA (783bp) protein (261aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_15
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14798..15721
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Vibrio marinus RepID=UPI0002DC654E
Uncharacterized protein {ECO:0000313|EMBL:EHP50030.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
L3_105_000M1_scaffold_1535_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15998..16462
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6B5R6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32203.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_105_000M1_scaffold_1535_17
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16459..16764
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Bacilli RepID=J7PPD0_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOJ75852.1}; TaxID=1169300 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0355.;"
L3_105_000M1_scaffold_1535_18
unknown

Not on your lists

16786..17028
DNA (243bp) protein (81aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_19
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17193..18707
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DAC269
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF09271.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_105_000M1_scaffold_1535_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18902..19996
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED76_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73245.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_105_000M1_scaffold_1535_21
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20091..20909
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TDS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ63803.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_105_000M1_scaffold_1535_22
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21153..21419
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9L1L1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS49647.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_105_000M1_scaffold_1535_23
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21419..21697
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KTT0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS49646.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L3_105_000M1_scaffold_1535_24
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22008..22769
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D2D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD84515.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_105_000M1_scaffold_1535_25
unknown

Not on your lists

comp(22919..23077)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_105_000M1_scaffold_1535_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23363..24424
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED82_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73233.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying 26 items

View Taxonomy