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L3_105_000M1_scaffold_2020

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2020_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..644)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UCB5_RUMA7
Uncharacterized protein {ECO:0000313|EMBL:EXM39078.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L3_105_000M1_scaffold_2020_2
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(688..1698)
DNA (1011bp) protein (337aa)
Intein C-terminal splicing region n=1 Tax=Clostridium sp. L2-50 RepID=A7VI55_9CLOT
Intein C-terminal splicing region {ECO:0000313|EMBL:EDO56914.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Hedgehog/intein hint domain-containing protein
L3_105_000M1_scaffold_2020_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1747..2307)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6S0G2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48831.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2020_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2310..3134)
DNA (825bp) protein (275aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=B0MNZ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48832.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2020_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3179..3877)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS00634.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_2020_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4162..5247
DNA (1086bp) protein (362aa)
Cellulase (glycosyl hydrolase family 5). (EC:3.2.1.78)
Cellulase (Glycosyl hydrolase family 5) n=2 Tax=root RepID=R6RU16_9FIRM
Cellulase (Glycosyl hydrolase family 5) {ECO:0000313|EMBL:CDC48834.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2020_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5367..6062
DNA (696bp) protein (232aa)
Predicted metal-dependent hydrolase n=2 Tax=root RepID=D4JRT0_9FIRM
Predicted metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CBK95799.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2020_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6107..6949)
DNA (843bp) protein (281aa)
EDD domain protein, DegV family n=2 Tax=root RepID=B0MNZ4_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EDS00631.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
EDD domain protein, DegV family
L3_105_000M1_scaffold_2020_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7156..8508)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK59_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34142.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2020_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8730..9767
DNA (1038bp) protein (346aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK60_9FIRM
GDSL-like Lipase/Acylhydrolase.
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:CBL34143.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2020_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9896..11986
DNA (2091bp) protein (697aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBL34144.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK61_9FIRM
L3_105_000M1_scaffold_2020_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12006..13211
DNA (1206bp) protein (402aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-1-phosphate adenylyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRT5_9FIRM
L3_105_000M1_scaffold_2020_13
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13231..14352
DNA (1122bp) protein (374aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SQF2_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CDC48847.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2020_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14599..15471
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK65_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34148.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2020_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15849..16523
DNA (675bp) protein (225aa)
CobQ/CobB/MinD/ParA nucleotide binding domain n=2 Tax=Eubacterium siraeum RepID=D4JRT7_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain.
CobQ/CobB/MinD/ParA nucleotide binding domain {ECO:0000313|EMBL:CBK95806.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2020_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16604..16822
DNA (219bp) protein (73aa)
2-oxoglutarate ferredoxin oxidoreductase, delta subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, delta subunit n=3 Tax=Eubacterium RepID=D4MK67_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS00621.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_2020_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16815..17882
DNA (1068bp) protein (356aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit {ECO:0000313|EMBL:CBL34151.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBL34151.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK68_9FIRM
L3_105_000M1_scaffold_2020_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17882..18622
DNA (741bp) protein (247aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit n=2 Tax=Eubacterium RepID=D4MK69_9FIRM
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases beta subunit {ECO:0000313|EMBL:CDC48856.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2020_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18619..19149
DNA (531bp) protein (177aa)
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:CBK95810.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBK95810.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit n=4 Tax=Eubacterium RepID=D4JRU1_9FIRM
Displaying 19 items

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