ggKbase home page

L3_105_000M1_scaffold_2197

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2197_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(294..1130)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01553.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_2197_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1166..1333)
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM70_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34853.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2197_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1527..2855
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL57_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC46009.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
putative efflux protein, MATE family
L3_105_000M1_scaffold_2197_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3001..3558
DNA (558bp) protein (186aa)
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Inorganic pyrophosphatase n=3 Tax=root RepID=D4MM68_9FIRM
L3_105_000M1_scaffold_2197_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3512..4096
DNA (585bp) protein (195aa)
Maf-like protein BN788_00117 n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RDW2_9FIRM
Maf-like protein BN788_00117 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
MAF protein
L3_105_000M1_scaffold_2197_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4121..4384
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46004.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_2197_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4565..5473
DNA (909bp) protein (303aa)
Predicted transcriptional regulators n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MM65_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL34848.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2197_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5460..7316
DNA (1857bp) protein (619aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLD1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS01545.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ABC-type multidrug transport system, ATPase and permease components
L3_105_000M1_scaffold_2197_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7309..9123
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTC4_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK96343.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
ABC-type multidrug transport system, ATPase and permease components
L3_105_000M1_scaffold_2197_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9179..11239)
DNA (2061bp) protein (687aa)
Ferrous iron transport protein B n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RSG1_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CDC45996.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
small GTP-binding protein domain
L3_105_000M1_scaffold_2197_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11304..14207)
DNA (2904bp) protein (968aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLC3_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDS01542.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_105_000M1_scaffold_2197_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14646..14918
DNA (273bp) protein (91aa)
Acetyltransferase, GNAT family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLC2_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS01541.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Acetyltransferases
L3_105_000M1_scaffold_2197_13
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15291..17024
DNA (1734bp) protein (578aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R910_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDC45398.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Methyl-accepting chemotaxis protein
L3_105_000M1_scaffold_2197_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17304..17513
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NQK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99967.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_105_000M1_scaffold_2197_15
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17720..17809
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SSH9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP26727.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Displaying 15 items

View Taxonomy