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L3_105_000M1_scaffold_2261

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2261_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1021
DNA (1020bp) protein (340aa)
Fibronectin type III domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRY6_9FIRM
Fibronectin type III domain.
Fibronectin type III domain {ECO:0000313|EMBL:CBK95855.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2261_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1742..4033
DNA (2292bp) protein (764aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases n=3 Tax=root RepID=D4JVD8_9FIRM
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBK97057.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L3_105_000M1_scaffold_2261_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4840..5391
DNA (552bp) protein (184aa)
RNA:NAD 2'-phosphotransferase (EC:2.7.1.-)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299, ECO:0000313|EMBL:CBL33408.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI25_9FIRM
L3_105_000M1_scaffold_2261_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5609..6190
DNA (582bp) protein (194aa)
Probable proton-coupled thiamine transporter YuaJ n=2 Tax=Eubacterium siraeum RepID=D4MI24_9FIRM
probable proton-coupled thiamine transporter YuaJ
Probable proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CBL33407.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2261_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6242..7177)
DNA (936bp) protein (312aa)
ABC-type transport system involved in Fe-S cluster assembly, permease component n=4 Tax=root RepID=D4JVD5_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, permease component
ABC-type transport system involved in Fe-S cluster assembly, permease component {ECO:0000313|EMBL:CBK97054.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2261_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7186..7929)
DNA (744bp) protein (248aa)
ABC-type transport system involved in Fe-S cluster assembly, ATPase component n=2 Tax=Eubacterium siraeum RepID=D4JVD4_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
ABC-type transport system involved in Fe-S cluster assembly, ATPase component {ECO:0000313|EMBL:CBK97053.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2261_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8020..9030
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0ML27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01601.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_2261_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9285..10577
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0ML29_9FIRM
L3_105_000M1_scaffold_2261_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10577..11368
DNA (792bp) protein (264aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0ML30_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS01604.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_105_000M1_scaffold_2261_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11450..13423
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RLV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46294.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_2261_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13438..14115
DNA (678bp) protein (226aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CBL33401.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Eubacterium siraeum RepID=D4MI18_9FIRM
L3_105_000M1_scaffold_2261_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14135..14629
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI17_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33400.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2261_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14690..15232
DNA (543bp) protein (181aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=2 Tax=Eubacterium RepID=B0ML34_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS01608.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_2261_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16172..16606)
DNA (435bp) protein (145aa)
FeS cluster assembly scaffold protein NifU, Clostridium type n=3 Tax=Eubacterium RepID=D4JVC9_9FIRM
FeS cluster assembly scaffold protein NifU, Clostridium type
FeS cluster assembly scaffold protein NifU Clostridium type {ECO:0000313|EMBL:CDC49392.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2261_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16638..17834)
DNA (1197bp) protein (399aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000313|EMBL:CBL33397.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Cysteine desulfurase NifS n=6 Tax=root RepID=D4JVC8_9FIRM
Displaying 15 items

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