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L3_105_000M1_scaffold_2335

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2335_1
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..160)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R8M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45268.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_2335_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..1532)
DNA (1386bp) protein (462aa)
Putative efflux protein, MATE family n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJJ7_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL33930.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2335_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1725..3152
DNA (1428bp) protein (476aa)
Glycosyl hydrolase family 25 n=2 Tax=Eubacterium RepID=B0MR33_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EDR99949.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_105_000M1_scaffold_2335_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3232..4626)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR39_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDR99956.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Na+-driven multidrug efflux pump
L3_105_000M1_scaffold_2335_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4653..5216)
DNA (564bp) protein (188aa)
Transcriptional regulator, MarR family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR40_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDR99957.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
MarR family transcriptional regulator
L3_105_000M1_scaffold_2335_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5659..6066)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MR41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99958.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_2335_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6346..7746
DNA (1401bp) protein (467aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Eubacterium RepID=B0MJW1_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDS02012.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
FAD dependent oxidoreductase
L3_105_000M1_scaffold_2335_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7763..8338
DNA (576bp) protein (192aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Xanthine phosphoribosyltransferase n=2 Tax=Eubacterium siraeum RepID=D4MJK2_9FIRM
L3_105_000M1_scaffold_2335_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8592..9734
DNA (1143bp) protein (381aa)
Basic membrane protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R8S2_9FIRM
Basic membrane protein {ECO:0000313|EMBL:CDC45313.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
nucleoside-binding protein
L3_105_000M1_scaffold_2335_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9870..11402
DNA (1533bp) protein (511aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=2 Tax=Eubacterium RepID=D4JVU9_9FIRM
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC45316.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_2335_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11399..12466
DNA (1068bp) protein (356aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVV0_9FIRM
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CBK97219.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2335_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12466..13410
DNA (945bp) protein (315aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJK6_9FIRM
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:CBL33939.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_2335_13
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13382..14029
DNA (648bp) protein (216aa)
RNA polymerase sigma factor sigma-70 family n=2 Tax=Eubacterium RepID=R6RJ19_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDC45324.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
RNA polymerase sigma factor, sigma-70 family
L3_105_000M1_scaffold_2335_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13998..16493
DNA (2496bp) protein (832aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJK8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33941.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Displaying 14 items

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