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L3_105_000M1_scaffold_1523

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1523_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(356..3277)
DNA (2922bp) protein (974aa)
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV7_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats
X-X-X-Leu-X-X-Gly heptad repeats {ECO:0000313|EMBL:CBK95826.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1523_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3279..3980)
DNA (702bp) protein (234aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRV6_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK95825.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1523_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4092..4721)
DNA (630bp) protein (210aa)
Transcriptional regulator n=2 Tax=Eubacterium siraeum RepID=D4MK85_9FIRM
Transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS00595.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_1523_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4999..5685
DNA (687bp) protein (229aa)
Redox-sensing transcriptional repressor Rex n=3 Tax=root RepID=B0MNW1_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
redox-sensing transcriptional repressor Rex
L3_105_000M1_scaffold_1523_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5718..5966
DNA (249bp) protein (83aa)
NADH:ubiquinone oxidoreductase 24 kD subunit n=5 Tax=root RepID=D4JRV4_9FIRM
NADH:ubiquinone oxidoreductase 24 kD subunit
NADH:ubiquinone oxidoreductase 24 kD subunit {ECO:0000313|EMBL:CBK95823.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1523_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6007..6390
DNA (384bp) protein (128aa)
Thioesterase superfamily n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPT5_9FIRM
Thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CDC49695.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_1523_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6394..8076
DNA (1683bp) protein (561aa)
Iron only hydrogenase large subunit, C-terminal domain n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK82_9FIRM
Iron only hydrogenase large subunit, C-terminal domain
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBL34165.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1523_8
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8063..9250
DNA (1188bp) protein (396aa)
Stage II sporulation protein E (SpoIIE) n=2 Tax=Eubacterium RepID=D4MK81_9FIRM
Stage II sporulation protein E (SpoIIE).
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CDC49678.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_1523_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9677..11158
DNA (1482bp) protein (494aa)
Iron only hydrogenase large subunit, C-terminal domain n=2 Tax=Eubacterium siraeum RepID=D4JRV0_9FIRM
Iron only hydrogenase large subunit, C-terminal domain
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBL34163.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1523_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11468..12415
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR family n=2 Tax=Eubacterium RepID=B0MNW7_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC49673.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Transcriptional regulator
L3_105_000M1_scaffold_1523_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12430..13458
DNA (1029bp) protein (343aa)
Cellulase M and related proteins (EC:3.2.1.4)
Cellulase M and related proteins {ECO:0000313|EMBL:CBL34161.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CBL34161.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Cellulase M and related proteins n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MK78_9FIRM
L3_105_000M1_scaffold_1523_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13451..14476
DNA (1026bp) protein (342aa)
Cellulase M and related proteins (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNW9_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EDS00606.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_1523_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14473..15195
DNA (723bp) protein (241aa)
Acetyltransferase, GNAT family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNX0_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS00607.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Acetyltransferase (GNAT) family.
L3_105_000M1_scaffold_1523_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15198..16457
DNA (1260bp) protein (420aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU5_9FIRM
Cystathionine beta-lyase family protein involved in aluminum resistance
Cystathionine beta-lyase family protein involved in aluminum resistance {ECO:0000313|EMBL:CBK95814.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1523_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16531..17409
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRU4_9FIRM
conserved hypothetical protein TIGR00255
Uncharacterized protein {ECO:0000313|EMBL:CBK95813.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1523_16
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17472..18593)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1219 RepID=R5ST36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ56383.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
hypothetical protein
L3_105_000M1_scaffold_1523_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18763..20043)
DNA (1281bp) protein (427aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNX5_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS00612.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_1523_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20173..22776)
DNA (2604bp) protein (868aa)
ATP-dependent chaperone ClpB n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPQ4_9FIRM
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_1523_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22809..23477)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MNX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS00615.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_1523_20
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23728..24147
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H4X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY19826.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 20 items

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