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L3_105_000M1_scaffold_1543

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1543_1
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(221..526)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=B0MRX4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC48779.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_1543_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(741..1001)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RLZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48780.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_1543_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1129..1992
DNA (864bp) protein (288aa)
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Pyridoxal/pyridoxine/pyridoxamine kinase n=3 Tax=Eubacterium RepID=D4MKK3_9FIRM
L3_105_000M1_scaffold_1543_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3494..3967
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=2 Tax=Eubacterium siraeum RepID=D4JS62_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK95931.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1543_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4041..7103)
DNA (3063bp) protein (1021aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34282.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_6
unknown

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comp(7127..7402)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_105_000M1_scaffold_1543_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7430..8065
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=2 Tax=Eubacterium siraeum RepID=B0MRU0_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDR99508.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_1543_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8150..10312
DNA (2163bp) protein (721aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ7_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase {ECO:0000313|EMBL:CBL34280.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_105_000M1_scaffold_1543_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10373..10948
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MRT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99506.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
membrane protein
L3_105_000M1_scaffold_1543_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10969..12729
DNA (1761bp) protein (587aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ6_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL34279.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12729..14468
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRT6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR99504.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ABC-type multidrug transport system, ATPase and permease components
L3_105_000M1_scaffold_1543_12
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14482..15078
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y0F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02463.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
eqbH; ABC transporter permease
L3_105_000M1_scaffold_1543_13
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15075..15755
DNA (681bp) protein (227aa)
Cobalt transport protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CLN0_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:ESE30982.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
cobalt transport protein
L3_105_000M1_scaffold_1543_14
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15752..17164
DNA (1413bp) protein (471aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CQ41_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ESE30981.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
ABC transporter related protein
L3_105_000M1_scaffold_1543_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17119..17301)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RN71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44491.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_1543_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17262..17924)
DNA (663bp) protein (221aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ4_9FIRM
Predicted amidophosphoribosyltransferases
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CBL34277.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17905..20100)
DNA (2196bp) protein (732aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34276.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20127..20888)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34275.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20857..21018)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS57_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95926.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_1543_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21070..22131)
DNA (1062bp) protein (354aa)
Transcriptional regulator, TetR family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRT2_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDR99500.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
transcriptional regulator
L3_105_000M1_scaffold_1543_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22182..22337
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Eubacterium siraeum RepID=B0MRT1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34272.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_1543_22
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22330..23892
DNA (1563bp) protein (521aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RN60_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDC44481.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_1543_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23889..24236
DNA (348bp) protein (116aa)
Mn-containing catalase n=4 Tax=Eubacterium RepID=D4JS54_9FIRM
Mn-containing catalase
Mn-containing catalase {ECO:0000313|EMBL:CDC44479.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Displaying 23 items

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