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L3_105_000M1_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_408_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..615)
DNA (615bp) protein (205aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJX6_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL34059.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(790..1290)
DNA (501bp) protein (167aa)
Predicted membrane protein n=2 Tax=Eubacterium siraeum RepID=D4MJX7_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL34060.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1628..1885
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHX2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33355.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1938..2084)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34061.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2219..3607
DNA (1389bp) protein (463aa)
Putative efflux protein, MATE family n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJX9_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL34062.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3678..5108)
DNA (1431bp) protein (477aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBL34063.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL34063.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJY0_9FIRM
L3_105_000M1_scaffold_408_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5492..8266
DNA (2775bp) protein (925aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ73_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDS00052.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_408_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8493..8900
DNA (408bp) protein (136aa)
Transcriptional regulators n=3 Tax=root RepID=D4MJY2_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL34065.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8926..9579
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RRK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45711.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_408_10
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10632..12704)
DNA (2073bp) protein (691aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=3 Tax=root RepID=B0MQ69_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDC49646.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_408_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12982..13356
DNA (375bp) protein (125aa)
Predicted transcriptional regulators n=2 Tax=Eubacterium siraeum RepID=D4MJY5_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL34068.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13353..14252
DNA (900bp) protein (300aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJY6_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL34069.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14227..16488
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS00045.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_408_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16764..18257
DNA (1494bp) protein (498aa)
ABC transporter, solute-binding protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJM7_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS02101.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_105_000M1_scaffold_408_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18505..19533)
DNA (1029bp) protein (343aa)
Predicted sensor domain n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJY8_9FIRM
Predicted sensor domain
Predicted sensor domain {ECO:0000313|EMBL:CBL34071.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19853..21280
DNA (1428bp) protein (476aa)
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484, ECO:0000313|EMBL:CBL34072.1};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Glycogen synthase n=3 Tax=Eubacterium RepID=D4MJY9_9FIRM
L3_105_000M1_scaffold_408_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21386..22429
DNA (1044bp) protein (348aa)
K+-dependent Na+/Ca+ exchanger related-protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJZ0_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger related-protein {ECO:0000313|EMBL:CBL34073.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_18

Not on your lists

22441..22887
DNA (447bp) protein (149aa)
GCN5-related N-acetyltransferase n=1 Tax=human gut metagenome RepID=K1TA23_9ZZZZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EKC66473.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
GCN5-like N-acetyltransferase
L3_105_000M1_scaffold_408_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23050..24555
DNA (1506bp) protein (502aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJZ1_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL34074.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24611..24988)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJZ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34075.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24989..25702)
DNA (714bp) protein (238aa)
Predicted membrane protein n=2 Tax=Eubacterium RepID=D4MJZ3_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CDC44320.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_408_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25791..27350
DNA (1560bp) protein (520aa)
Bacillus/Clostridium GerA spore germination protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJZ4_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CBL34077.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27334..28407
DNA (1074bp) protein (358aa)
Spore germination protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJR9_9FIRM
Spore germination protein {ECO:0000313|EMBL:EDS02051.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Spore germination protein.
L3_105_000M1_scaffold_408_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28404..29612
DNA (1209bp) protein (403aa)
Germination protein, Ger(X)C family n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJZ6_9FIRM
germination protein, Ger(x)C family
Germination protein, Ger(X)C family {ECO:0000313|EMBL:CBL34079.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_408_25
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29969..30883)
DNA (915bp) protein (305aa)
Lipoprotein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R6M4_9FIRM
Lipoprotein {ECO:0000313|EMBL:CDC43555.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_105_000M1_scaffold_408_26
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31087..31764)
DNA (678bp) protein (226aa)
ABC transporter permease protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKL7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC43556.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC-type metal ion transport system, permease component
L3_105_000M1_scaffold_408_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31777..32763)
DNA (987bp) protein (329aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC transporter ATP-binding protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SAB8_9FIRM
ABC-type metal ion transport system, ATPase component
L3_105_000M1_scaffold_408_28
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33153..33875
DNA (723bp) protein (241aa)
Transcriptional regulator n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R3U4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC43558.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Transcriptional regulator
L3_105_000M1_scaffold_408_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33891..39959
DNA (6069bp) protein (2023aa)
Repeat protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MK72_9FIRM
Repeat protein {ECO:0000313|EMBL:EDS01912.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Listeria-Bacteroides repeat domain (List_Bact_rpt).
L3_105_000M1_scaffold_408_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40077..41144)
DNA (1068bp) protein (356aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Eubacterium RepID=B0MK71_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EDS01911.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Bacterial extracellular solute-binding protein, family 3
Displaying items 1-30 of 48 in total

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