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L3_105_000M1_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_480_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

801..1085
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SEG7_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC02316.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L3_105_000M1_scaffold_480_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1101..2504
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37917
Conserved domain protein {ECO:0000313|EMBL:EGC02305.1}; Flags: Fragment;; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_105_000M1_scaffold_480_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2525..2770
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37916
Conserved domain protein {ECO:0000313|EMBL:EGC02030.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_105_000M1_scaffold_480_4
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2946..3224
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VRC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83102.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L3_105_000M1_scaffold_480_5
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3224..3700
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37913
Uncharacterized protein {ECO:0000313|EMBL:CCZ83101.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L3_105_000M1_scaffold_480_6
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3804..5276
DNA (1473bp) protein (491aa)
conjugal transfer protein TraG n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37912
Uncharacterized protein {ECO:0000313|EMBL:EWM55200.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Type IV secretory pathway, VirD4 components
L3_105_000M1_scaffold_480_7
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5984..6643
DNA (660bp) protein (220aa)
Group II intron reverse transcriptase maturase n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63) RepID=F8IRJ4_STREC
hypothetical protein
Contig000050, whole genome shotgun sequence {ECO:0000313|EMBL:KIS15083.1}; TaxID=1381091 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus SzAM60.;"
L3_105_000M1_scaffold_480_8
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6625..7461
DNA (837bp) protein (279aa)
Uncharacterized protein n=13 Tax=Streptococcus agalactiae RepID=S8GMI6_STRAG
Uncharacterized protein {ECO:0000313|EMBL:EWM55199.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_9
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7510..8220
DNA (711bp) protein (237aa)
conjugal transfer protein TraG n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37912
Uncharacterized protein {ECO:0000313|EMBL:EGC02708.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_105_000M1_scaffold_480_10
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8207..8731
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LEI3_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18028.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_480_11
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8865..9434
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37817
tRNA (Adenine-N6)-methyltransferase {ECO:0000313|EMBL:EWM55190.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_12
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9434..10375
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37816
Uncharacterized protein {ECO:0000313|EMBL:EWM55196.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
TrbL/VirB6 plasmid conjugal transfer protein.
L3_105_000M1_scaffold_480_13
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10395..10772
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37815
Uncharacterized protein {ECO:0000313|EMBL:EWM55195.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_14
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10837..13278
DNA (2442bp) protein (814aa)
conjugal transfer protein TraE n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37814
Conjugal transfer protein TraE {ECO:0000313|EMBL:EWM55194.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Domain of unknown function DUF87.
L3_105_000M1_scaffold_480_15
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13300..16077
DNA (2778bp) protein (926aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37813
Uncharacterized protein {ECO:0000313|EMBL:EWM53944.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_16
unknown

Not on your lists

16087..16398
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36E2E
L3_105_000M1_scaffold_480_17
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16379..17275
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37811
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18037.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_480_18
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17294..17566
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37810
Uncharacterized protein {ECO:0000313|EMBL:EWM53947.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_19
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17651..18835
DNA (1185bp) protein (395aa)
DNA-cytosine methyltransferase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3780F
Uncharacterized protein {ECO:0000313|EMBL:EWM53948.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Site-specific DNA methylase
L3_105_000M1_scaffold_480_20
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18828..19967
DNA (1140bp) protein (380aa)
phosphoadenosine phosphosulfate reductase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3780E
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes {ECO:0000313|EMBL:CBL18040.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_480_21
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19973..20830
DNA (858bp) protein (286aa)
Fibronectin type III domain protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UKW5_RUMA7
Uncharacterized protein {ECO:0000313|EMBL:EWM53949.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Fibronectin type III domain protein
L3_105_000M1_scaffold_480_22
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20848..21483
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3780B
Uncharacterized protein {ECO:0000313|EMBL:EWM53950.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_105_000M1_scaffold_480_23
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21526..22347)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCB6_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC02990.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_105_000M1_scaffold_480_24
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22448..24460
DNA (2013bp) protein (671aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36E29
L3_105_000M1_scaffold_480_25
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24515..24850)
DNA (336bp) protein (112aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCS4_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC02917.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_105_000M1_scaffold_480_26
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24966..25478
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37809
Uncharacterized protein {ECO:0000313|EMBL:CDE82186.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_105_000M1_scaffold_480_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25475..26167
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37808
Conserved domain protein {ECO:0000313|EMBL:CDE82185.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_105_000M1_scaffold_480_28
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26256..28307
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37807
Uncharacterized protein {ECO:0000313|EMBL:CDE82184.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L3_105_000M1_scaffold_480_29
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28308..39650
DNA (11343bp) protein (3781aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37806
Mismatch repair ATPase (MutS family)
Mismatch repair ATPase (MutS family) {ECO:0000313|EMBL:CBL18048.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_105_000M1_scaffold_480_30
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39706..40002)
DNA (297bp) protein (99aa)
RyR domain protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SY49_9FIRM
RyR domain protein {ECO:0000313|EMBL:EDP25242.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
ryanodine receptor
Displaying items 1-30 of 46 in total

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