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L3_105_000M1_scaffold_570

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_570_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(88..447)
DNA (360bp) protein (120aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBL33740.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL33740.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
ADP-ribose pyrophosphatase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJ07_9FIRM
L3_105_000M1_scaffold_570_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(444..689)
DNA (246bp) protein (82aa)
Transcriptional regulator n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJ06_9FIRM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL33739.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(814..1752)
DNA (939bp) protein (313aa)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D (EC:3.5.1.1)
L-asparaginase type I n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SPI9_9FIRM
L-asparaginase type I {ECO:0000313|EMBL:CDC48497.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_570_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2168..3022
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48500.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Protein of unknown function (DUF2628).
L3_105_000M1_scaffold_570_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3111..4883
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RZP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48501.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_570_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4950..6284
DNA (1335bp) protein (445aa)
Potassium uptake protein TrkH family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RI23_9FIRM
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDC48503.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Trk-type K+ transport systems, membrane components
L3_105_000M1_scaffold_570_7
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6286..7023
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RLA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48505.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Predicted O-methyltransferase
L3_105_000M1_scaffold_570_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7033..7863
DNA (831bp) protein (277aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKC0_9FIRM
conserved hypothetical protein TIGR00096
L3_105_000M1_scaffold_570_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7905..8060
DNA (156bp) protein (52aa)
Uncharacterized protein n=5 Tax=root RepID=B0MKB9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33733.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8136..8282
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=4 Tax=Eubacterium RepID=B0MKA5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97438.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_570_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8396..9769
DNA (1374bp) protein (458aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ8_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CBL33731.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9816..10613)
DNA (798bp) protein (266aa)
Predicted metal-dependent hydrolase of the TIM-barrel fold n=2 Tax=root RepID=D4JWH1_9FIRM
Predicted metal-dependent hydrolase of the TIM-barrel fold
Predicted metal-dependent hydrolase of the TIM-barrel fold {ECO:0000313|EMBL:CBK97440.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_570_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10631..11107)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33729.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11306..12571)
DNA (1266bp) protein (422aa)
ABC transporter permease protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RZQ4_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC48516.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ABC-type sugar transport system, permease component
L3_105_000M1_scaffold_570_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12584..13849)
DNA (1266bp) protein (422aa)
ABC-type sugar transport systems, permease components n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ4_9FIRM
ABC-type sugar transport systems, permease components
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:CBL33727.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13842..16199)
DNA (2358bp) protein (786aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL33726.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
hypothetical protein
L3_105_000M1_scaffold_570_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16218..16856)
DNA (639bp) protein (213aa)
Yip1 domain n=2 Tax=Eubacterium siraeum RepID=D4MIZ2_9FIRM
Yip1 domain.
Uncharacterized protein {ECO:0000313|EMBL:EDS01865.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_570_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16859..18460)
DNA (1602bp) protein (534aa)
NHL repeat protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKB6_9FIRM
NHL repeat protein {ECO:0000313|EMBL:EDS01864.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_570_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18486..19349)
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIZ0_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL33723.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_20
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19398..20333)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RZR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48531.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Binding-protein-dependent transport systems inner membrane component
L3_105_000M1_scaffold_570_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20400..23555)
DNA (3156bp) protein (1052aa)
ABC transporter solute-binding protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SPM5_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDC48532.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Extracellular solute-binding protein family 1
L3_105_000M1_scaffold_570_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23629..24594)
DNA (966bp) protein (322aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIY9_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL33722.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24594..25289)
DNA (696bp) protein (232aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIY8_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL33721.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25378..25488)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIY7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33720.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25803..27716)
DNA (1914bp) protein (638aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKB0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS01858.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_105_000M1_scaffold_570_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27788..29020)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIY5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33718.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_570_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29081..31456)
DNA (2376bp) protein (792aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKA8_9FIRM
L3_105_000M1_scaffold_570_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31514..32536)
DNA (1023bp) protein (341aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Eubacterium RepID=D4MIY3_9FIRM
L3_105_000M1_scaffold_570_29
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32659..32862)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RTC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48539.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_570_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32873..36127)
DNA (3255bp) protein (1085aa)
Fibronectin type III domain protein (Fragment) n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJQ1_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EDS02079.1}; Flags: Fragment;; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
CHAP domain./Bacterial SH3 domain./Fibronectin type III domain.
Displaying items 1-30 of 40 in total

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