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L3_105_000M1_scaffold_742

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_742_1
unknown

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_105_000M1_scaffold_742_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(310..3471)
DNA (3162bp) protein (1054aa)
5-methylcytosine-specific restriction enzyme (Fragment) n=1 Tax=human gut metagenome RepID=K1RFE2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EXM40181.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L3_105_000M1_scaffold_742_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3755..5023)
DNA (1269bp) protein (423aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJP2_9FIRM
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBL33975.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_742_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5165..6583
DNA (1419bp) protein (473aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
PPIC-type PPIASE domain n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SJ21_9FIRM
PPIC-type PPIASE domain.
L3_105_000M1_scaffold_742_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6638..7522
DNA (885bp) protein (295aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RUB1_9FIRM
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins {ECO:0000313|EMBL:CDC46596.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_742_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8216..9025)
DNA (810bp) protein (270aa)
Uncharacterized protein n=2 Tax=root RepID=R6RFK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46595.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_742_7
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9042..10661)
DNA (1620bp) protein (540aa)
Beta-mannanase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RCJ0_9FIRM
Beta-mannanase {ECO:0000313|EMBL:CDC46593.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Beta-mannanase
L3_105_000M1_scaffold_742_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10663..12849)
DNA (2187bp) protein (729aa)
Actin-like ATPase involved in cell division n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJN8_9FIRM
Actin-like ATPase involved in cell division
Actin-like ATPase involved in cell division {ECO:0000313|EMBL:CBL33971.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_742_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13057..13497
DNA (441bp) protein (147aa)
N-acetylglutamate synthase (EC:2.3.1.1)
N-acetylglutamate synthase {ECO:0000313|EMBL:CBL33970.1}; EC=2.3.1.1 {ECO:0000313|EMBL:CBL33970.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
N-acetylglutamate synthase n=2 Tax=Eubacterium siraeum RepID=D4MJN7_9FIRM
L3_105_000M1_scaffold_742_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13497..14837
DNA (1341bp) protein (447aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJX3_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EDS02004.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_742_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14876..14971
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JR30_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95549.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_742_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15144..15467
DNA (324bp) protein (108aa)
Uncharacterized protein conserved in bacteria n=5 Tax=root RepID=D4JR28_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK95547.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_742_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15467..16423
DNA (957bp) protein (319aa)
Putative DNA polymerase III, delta' subunit n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJX8_9FIRM
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EDS02008.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_742_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16444..17310
DNA (867bp) protein (289aa)
PSP1 C-terminal domain protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RMQ7_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDC46579.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Uncharacterized homolog of PSP1
L3_105_000M1_scaffold_742_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18097..19020)
DNA (924bp) protein (308aa)
RNA-binding protein n=1 Tax=Eubacterium siraeum RepID=UPI000376D724
S1 RNA binding domain protein {ECO:0000313|EMBL:CDC44524.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Ribosomal protein S1
L3_105_000M1_scaffold_742_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19232..21631
DNA (2400bp) protein (800aa)
CotH protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJN6_9FIRM
CotH protein {ECO:0000313|EMBL:EDS02087.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
CotH protein.
L3_105_000M1_scaffold_742_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22012..22215)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=4 Tax=Eubacterium RepID=D4JVR2_9FIRM
LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_742_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22375..24093)
DNA (1719bp) protein (573aa)
Phosphomannomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL84_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:CDC49648.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_742_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24349..25878
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJV1_9FIRM
Mg chelatase-related protein
Mg chelatase-like protein {ECO:0000313|EMBL:EDS02035.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_742_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26163..26792)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS02033.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L3_105_000M1_scaffold_742_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27006..27968
DNA (963bp) protein (321aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJU8_9FIRM
radical SAM protein, TIGR01212 family
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EDS02032.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_742_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28068..29246
DNA (1179bp) protein (393aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CBL33953.1}; EC=4.1.1.- {ECO:0000313|EMBL:CBL33953.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Carboxynorspermidine decarboxylase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJM0_9FIRM
L3_105_000M1_scaffold_742_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29606..29869
DNA (264bp) protein (88aa)
Phosphotransferase System HPr (HPr) Family n=3 Tax=Eubacterium siraeum RepID=D4JVS1_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphocarrier, HPr family {ECO:0000313|EMBL:EDS02029.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L3_105_000M1_scaffold_742_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30049..30771
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS02028.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein predicted by Glimmer/Critica
L3_105_000M1_scaffold_742_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31746..34301
DNA (2556bp) protein (852aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJU2_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS02026.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
diguanylate cyclase/phosphodiesterase with PAS sensor
L3_105_000M1_scaffold_742_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34747..35901
DNA (1155bp) protein (385aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MJU0_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EDS02024.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Bacterial cell division membrane protein
L3_105_000M1_scaffold_742_27
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35956..37206
DNA (1251bp) protein (417aa)
Galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SED7_9FIRM
Galactokinase {ECO:0000313|EMBL:CDC44962.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_742_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37255..38514)
DNA (1260bp) protein (420aa)
GTPase HflX n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJL5_9FIRM
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_742_29
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38591..40072
DNA (1482bp) protein (494aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RAQ8_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CDC44965.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_742_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40072..40917
DNA (846bp) protein (282aa)
nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000313|EMBL:CBL33946.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBL33946.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MJL3_9FIRM
Displaying items 1-30 of 34 in total

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