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L3_105_000M1_scaffold_940

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_940_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(161..1399)
DNA (1239bp) protein (413aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase {ECO:0000313|EMBL:CBL34690.1}; EC=6.2.1.30 {ECO:0000313|EMBL:CBL34690.1};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Phenylacetate-CoA ligase n=2 Tax=Eubacterium siraeum RepID=D4MLQ7_9FIRM
L3_105_000M1_scaffold_940_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1386..1979)
DNA (594bp) protein (198aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit (EC:1.2.7.8)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit n=4 Tax=Eubacterium RepID=D4JTT2_9FIRM
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit {ECO:0000313|EMBL:CDC44016.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_940_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1972..3843)
DNA (1872bp) protein (624aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=2 Tax=Eubacterium RepID=B0MNH8_9FIRM
L3_105_000M1_scaffold_940_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4194..5933)
DNA (1740bp) protein (580aa)
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MLQ4_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDC48723.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L3_105_000M1_scaffold_940_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5952..8639)
DNA (2688bp) protein (896aa)
Glycosyl hydrolase family 59 n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MLQ3_9FIRM
Glycosyl hydrolase family 59.
Glycosyl hydrolase family 59 {ECO:0000313|EMBL:CBL34686.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_940_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8736..9557)
DNA (822bp) protein (274aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MLQ2_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL34685.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_000M1_scaffold_940_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9969..10247)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JR25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95544.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_940_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10328..10975)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XAU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03447.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_105_000M1_scaffold_940_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10959..12302)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03448.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
abortive infection protein
L3_105_000M1_scaffold_940_10
unknown

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12593..12802
DNA (210bp) protein (70aa)

This feature has no annotations

L3_105_000M1_scaffold_940_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12853..13182)
DNA (330bp) protein (110aa)
Helix-turn-helix n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTT7_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK96506.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_940_12
unknown

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comp(13184..14302)
DNA (1119bp) protein (373aa)

This feature has no annotations

L3_105_000M1_scaffold_940_13
unknown

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comp(14618..15469)
DNA (852bp) protein (284aa)

This feature has no annotations

L3_105_000M1_scaffold_940_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(15493..16080)
DNA (588bp) protein (196aa)
ATPase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B4B467
Uncharacterized protein {ECO:0000313|EMBL:CDB86642.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_105_000M1_scaffold_940_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16287..16877)
DNA (591bp) protein (197aa)
Predicted phosphoesterase or phosphohydrolase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTT8_9FIRM
Predicted phosphoesterase or phosphohydrolase
Predicted phosphoesterase or phosphohydrolase {ECO:0000313|EMBL:CBK96507.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_940_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16955..17623)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JTT9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96508.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_940_17
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17894..18403)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS50634.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
L3_105_000M1_scaffold_940_18
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18357..18851)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2VEM8_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EWM53996.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
HTH/GGDEF domain-containing protein
L3_105_000M1_scaffold_940_19
unknown

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19368..19553
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_000M1_scaffold_940_20
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

19824..23054
DNA (3231bp) protein (1077aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LV42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62181.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
helicase/SNF2 domain-containing protein
L3_105_000M1_scaffold_940_21
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

23067..23714
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LTR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62180.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
hypothetical protein
L3_105_000M1_scaffold_940_22
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

23718..24791
DNA (1074bp) protein (358aa)
ATP-binding protein, putative n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7H3_DEHE1
ATP-binding protein
ATP-binding protein, putative {ECO:0000313|EMBL:AAW39611.1}; TaxID=243164 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
L3_105_000M1_scaffold_940_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24788..25666
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DG37_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76661.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_105_000M1_scaffold_940_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25659..27569
DNA (1911bp) protein (637aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTG9_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:CDB27725.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
DNA methylase
L3_105_000M1_scaffold_940_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27585..28166
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2SN22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68458.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_105_000M1_scaffold_940_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28163..31219
DNA (3057bp) protein (1019aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27723.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
type III restriction-modification system, restriction endonuclease subunit
L3_105_000M1_scaffold_940_27
Streptococcus thermophilus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31746..32693
DNA (948bp) protein (316aa)
Putative integrase n=1 Tax=Streptococcus thermophilus RepID=Q2MM22_STRTR
Putative integrase {ECO:0000313|EMBL:ABC55707.1}; TaxID=1308 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus thermophilus.;"
phage integrase
L3_105_000M1_scaffold_940_28
unknown

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comp(33188..33541)
DNA (354bp) protein (118aa)

This feature has no annotations

L3_105_000M1_scaffold_940_29
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34140..34325
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003651522
Uncharacterized protein {ECO:0000313|EMBL:CCY67723.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_940_30
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

35029..35931
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EKB6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX92893.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Transcriptional regulator
Displaying items 1-30 of 31 in total

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