ggKbase home page

L3_105_000M1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_120_1
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(146..1390)
DNA (1245bp) protein (415aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
tyrS1; tyrosine--tRNA ligase 1 (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDG7_9FIRM
L3_105_000M1_scaffold_120_2
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(1673..2212)
DNA (540bp) protein (180aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFK1_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE49342.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
acetyltransferase
L3_105_000M1_scaffold_120_3
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2375..2929)
DNA (555bp) protein (185aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:389 RepID=R7LT71_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE90938.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
metal dependent phosphohydrolase
L3_105_000M1_scaffold_120_4
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(2998..3396)
DNA (399bp) protein (133aa)
GTP diphosphokinase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IAB4_9FIRM
GTP diphosphokinase {ECO:0000313|EMBL:CDE48819.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
relA; GTP pyrophosphokinase
L3_105_000M1_scaffold_120_5
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(3488..4261)
DNA (774bp) protein (258aa)
Purine or other phosphorylase family 1 n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IBG6_9FIRM
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:CDE48821.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
purine phosphorylase family 1
L3_105_000M1_scaffold_120_6
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(4299..4814)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48822.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
NUDIX hydrolase
L3_105_000M1_scaffold_120_7
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(4830..5381)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IC10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48823.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
HAD superfamily hydrolase
L3_105_000M1_scaffold_120_8
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists


comp(5384..5938)
DNA (555bp) protein (185aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IAB8_9FIRM
Non-canonical purine NTP pyrophosphatase {ECO:0000313|EMBL:CDE48824.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
xanthosine triphosphate pyrophosphatase
L3_105_000M1_scaffold_120_9
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(5989..6492)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IB74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48825.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_120_10
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(6500..6982)
DNA (483bp) protein (161aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE38_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDE48827.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
putative acetyltransferase
L3_105_000M1_scaffold_120_11
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(6979..8040)
DNA (1062bp) protein (354aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IC15_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDE48828.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_120_12
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(8041..8793)
DNA (753bp) protein (251aa)
Cytidine/deoxycytidylate deaminase family protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IB78_9FIRM
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:CDE48830.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
cytidine/deoxycytidylate deaminase
L3_105_000M1_scaffold_120_13
unknown

Not on your lists

comp(9011..9109)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_105_000M1_scaffold_120_14
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(9131..9697)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IC20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48833.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_120_15
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(9703..10212)
DNA (510bp) protein (170aa)
ADP-ribose pyrophosphatase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IB82_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDE48835.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_120_16
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(10228..10467)
DNA (240bp) protein (80aa)
Putative peptidase E related protein n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NF94_9MOLU
Putative peptidase E related protein {ECO:0000313|EMBL:CDF11435.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
L3_105_000M1_scaffold_120_17
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(10525..12534)
DNA (2010bp) protein (670aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
UvrD/REP helicase n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HWL6_9MOLU
DNA/RNA helicase
L3_105_000M1_scaffold_120_18
Mycoplasma sp. CAG:611, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(12534..13310)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:611 RepID=R5Y7J5_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CDA22885.1}; TaxID=1262905 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:611.;"
ABC-type uncharacterized transport system, permease component
L3_105_000M1_scaffold_120_19
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13312..14112)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EAQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI91527.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
ABC transporter permease
L3_105_000M1_scaffold_120_20
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14109..15092)
DNA (984bp) protein (328aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:302 RepID=R6LZ99_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDB91390.1}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
natA2; ATP-binding transport protein NatA
L3_105_000M1_scaffold_120_21
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists


comp(15364..17106)
DNA (1743bp) protein (581aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEM6_9FIRM
L3_105_000M1_scaffold_120_22
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(17103..17627)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50088.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_120_23
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(18199..19350)
DNA (1152bp) protein (384aa)
Putative permease n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF54_9FIRM
Putative permease {ECO:0000313|EMBL:CDE50086.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_120_24
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(19406..19969)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50084.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_120_25
unknown

Not on your lists

comp(20042..20176)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_105_000M1_scaffold_120_26
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(20316..21458)
DNA (1143bp) protein (381aa)
Transposase IS605 OrfB family central region n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JD39_9FIRM
Transposase IS605 OrfB family central region {ECO:0000313|EMBL:CCY46911.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
transposase, is605 orfb family
L3_105_000M1_scaffold_120_27
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21589..23451)
DNA (1863bp) protein (621aa)
Membrane protein-like protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P6T0_9CLOT
Membrane protein-like protein {ECO:0000313|EMBL:CDF20580.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
hypothetical protein
L3_105_000M1_scaffold_120_28
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(23495..24046)
DNA (552bp) protein (184aa)
LemA family protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IG61_9FIRM
LemA family protein {ECO:0000313|EMBL:CDE50298.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
lemA; protein LemA
L3_105_000M1_scaffold_120_29
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(24127..27057)
DNA (2931bp) protein (977aa)
Chromosome partition protein Smc n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFU2_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
chromosome segregation protein SMC
L3_105_000M1_scaffold_120_30
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(27058..27708)
DNA (651bp) protein (217aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
rncS; ribonuclease III family protein (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IG66_9FIRM
Displaying items 1-30 of 127 in total

View Taxonomy