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L3_105_000M1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_363_1
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(1..1098)
DNA (1098bp) protein (366aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGT5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE51024.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
flavoprotein
L3_105_000M1_scaffold_363_2
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(1119..4190)
DNA (3072bp) protein (1024aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
addA; ATP-dependent helicase/nuclease subunit A (EC:3.6.4.12)
Recombination helicase AddA Firmicutes type n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK91_9FIRM
L3_105_000M1_scaffold_363_3
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(4171..6489)
DNA (2319bp) protein (773aa)
addB; similar to ATP-dependent helicase/deoxyribonuclease subunit B (EC:3.6.4.12)
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHD1_9FIRM
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000313|EMBL:CDE51030.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_4
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(6671..7465)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49899.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_5
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(7471..8241)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49901.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_6
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(8308..9420)
DNA (1113bp) protein (371aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF01_9FIRM
mnmA; tRNA-specific 2-thiouridylase mnma
L3_105_000M1_scaffold_363_7
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(9444..10019)
DNA (576bp) protein (192aa)
Stage II sporulation protein M n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDL0_9FIRM
Stage II sporulation protein M {ECO:0000313|EMBL:CDE49904.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_8
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(10215..10838)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49906.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_9
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(10917..12161)
DNA (1245bp) protein (415aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF05_9FIRM
tig; trigger factor
L3_105_000M1_scaffold_363_10
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(12240..12707)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDL5_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
greA; Transcription elongation factor
L3_105_000M1_scaffold_363_11
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(12754..13941)
DNA (1188bp) protein (396aa)
Peptidase U32 family n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE63_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDE49910.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
yrrO; protease YrrO
L3_105_000M1_scaffold_363_12
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(13934..14695)
DNA (762bp) protein (254aa)
Peptidase U32 family n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEP4_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDE49911.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_13
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(14688..15281)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49913.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
O-methyltransferase family protein
L3_105_000M1_scaffold_363_14
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(15294..16343)
DNA (1050bp) protein (350aa)
Aminodeoxychorismate lyase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE66_9FIRM
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CDE49915.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
pabC; aminodeoxychorismate lyase
L3_105_000M1_scaffold_363_15
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(16333..16611)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49917.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_16
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(16601..17023)
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
Putative Holliday junction resolvase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF14_9FIRM
putative holliday junction resolvase
L3_105_000M1_scaffold_363_17
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(17023..17268)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49920.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_363_18
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(17553..18410)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49921.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
AAA ATPase
L3_105_000M1_scaffold_363_19
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(18474..18899)
DNA (426bp) protein (142aa)
MutT/nudix family protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH60_9FIRM
MutT/nudix family protein {ECO:0000313|EMBL:CDE49922.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
putative hydrolase
L3_105_000M1_scaffold_363_20
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18975..19385)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:433 RepID=R6Y4G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD28755.1}; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
L3_105_000M1_scaffold_363_21
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19715..20680)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P9R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF21077.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
L3_105_000M1_scaffold_363_22
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21023..21532)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P520_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF20804.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
L3_105_000M1_scaffold_363_23
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(21633..25946)
DNA (4314bp) protein (1438aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF23_9FIRM
L3_105_000M1_scaffold_363_24
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(25947..28781)
DNA (2835bp) protein (945aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE81_9FIRM
L3_105_000M1_scaffold_363_25
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(28883..30322)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50213.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_363_26
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(30418..31806)
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF79_9FIRM
L3_105_000M1_scaffold_363_27
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(31821..34085)
DNA (2265bp) protein (755aa)
Lon protease n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFN5_9FIRM
Lon protease {ECO:0000313|EMBL:CDE50236.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ATP-dependent serine protease La
L3_105_000M1_scaffold_363_28
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

34204..34998
DNA (795bp) protein (265aa)
Zinc/iron permease n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II50_9FIRM
Zinc/iron permease {ECO:0000313|EMBL:CDE50237.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ZIP family zinc transporter
L3_105_000M1_scaffold_363_29
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35015..35905)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z8X6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37361.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
L3_105_000M1_scaffold_363_30
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(35994..37718)
DNA (1725bp) protein (575aa)
ABC-type multidrug transport system ATPase and permease component n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II43_9FIRM
ABC-type multidrug transport system ATPase and permease component {ECO:0000313|EMBL:CDE50998.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
multidrug ABC transporter ATPase and permease
Displaying items 1-30 of 61 in total

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