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L3_105_000M1_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_479_1
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49697.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_2
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(442..792)
DNA (351bp) protein (117aa)
Stage V sporulation protein AE n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFK9_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:CDE50594.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
SpoVA protein
L3_105_000M1_scaffold_479_3
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(792..1757)
DNA (966bp) protein (322aa)
Stage V sporulation protein AD n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IJ13_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDE50597.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
stage V sporulation protein AD
L3_105_000M1_scaffold_479_4
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(1759..2208)
DNA (450bp) protein (150aa)
Stage V sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFL4_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CDE50599.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
stage V sporulation protein AC
L3_105_000M1_scaffold_479_5
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(2231..2872)
DNA (642bp) protein (214aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGL0_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CDE50601.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
FliA2; DNA-directed RNA polymerase specialized sigma subunit
L3_105_000M1_scaffold_479_6
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(2872..3207)
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGZ3_9FIRM
Anti-sigma F factor antagonist {ECO:0000313|EMBL:CDE50603.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_7
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(3327..4757)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49648.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
cell envelope-related transcriptional attenuator
L3_105_000M1_scaffold_479_8
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(4836..6389)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49665.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_9
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(6398..7765)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49665.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_10
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(8038..8895)
DNA (858bp) protein (286aa)
YihY family protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEB5_9FIRM
YihY family protein {ECO:0000313|EMBL:CDE49668.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
putative ribonuclease BN
L3_105_000M1_scaffold_479_11
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(8888..10900)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7ICQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49669.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ggdef domain protein
L3_105_000M1_scaffold_479_12
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(10897..11379)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49671.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_13
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(11421..13427)
DNA (2007bp) protein (669aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGG8_9FIRM
L3_105_000M1_scaffold_479_14
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(13408..14295)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49673.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_479_15
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(14297..16390)
DNA (2094bp) protein (698aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7ICR1_9FIRM
pcrA; DNA helicase PcrA, ATP-dependent
L3_105_000M1_scaffold_479_16
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(16457..16852)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IDG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49675.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_17
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(16930..18237)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49676.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_18
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(18278..19078)
DNA (801bp) protein (267aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IEC5_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_479_19
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(19038..20003)
DNA (966bp) protein (322aa)
Oligoribonuclease (NanoRNAse) 3' 5'-bisphosphate nucleotidase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7ICR6_9FIRM
Oligoribonuclease (NanoRNAse) 3' 5'-bisphosphate nucleotidase {ECO:0000313|EMBL:CDE49679.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
nrnA; 3',5'-bisphosphate nucleotidase
L3_105_000M1_scaffold_479_20
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(20017..21207)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
ackA; Acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IE24_9FIRM
L3_105_000M1_scaffold_479_21
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(21543..22715)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50826.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_22
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22848..23045)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:609 RepID=R7P5D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF20090.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
L3_105_000M1_scaffold_479_23
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23085..24266)
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:609 RepID=R7P6W9_9CLOT
tRNA sulfurtransferase
L3_105_000M1_scaffold_479_24
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(24325..25449)
DNA (1125bp) protein (375aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase class V n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IIJ9_9FIRM
Aminotransferase class V {ECO:0000313|EMBL:CDE50417.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_25
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(25464..27182)
DNA (1719bp) protein (573aa)
Septation ring formation regulator EzrA n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGG9_9FIRM
Septation ring formation regulator EzrA {ECO:0000313|EMBL:CDE50418.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
septation ring formation regulator EzrA
L3_105_000M1_scaffold_479_26
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(27253..27807)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50420.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_479_27
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

27907..29877
DNA (1971bp) protein (657aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IIK4_9FIRM
L3_105_000M1_scaffold_479_28
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(29904..30671)
DNA (768bp) protein (256aa)
R.MvaI n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IF43_9FIRM
R.MvaI {ECO:0000313|EMBL:CDE50424.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_479_29
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

30809..31225
DNA (417bp) protein (139aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IIK9_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDE50427.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
N-acetyltransferase GCN5
L3_105_000M1_scaffold_479_30
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(32464..33876)
DNA (1413bp) protein (471aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGJ2_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
Displaying items 1-30 of 61 in total

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