ggKbase home page

L3_105_000M1_scaffold_596

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_596_1
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

2..88
DNA (87bp) protein (29aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGT5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE51024.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_2
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

85..1641
DNA (1557bp) protein (519aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK87_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE51022.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
oxidoreductase, FAD-binding
L3_105_000M1_scaffold_596_3
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

1698..1808
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51019.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_4
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

1962..2393
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51015.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_5
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

2454..2849
DNA (396bp) protein (132aa)
N utilization substance protein B homolog n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II61_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
transcription termination protein NusB
L3_105_000M1_scaffold_596_6
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

2851..3651
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51012.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_7
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

3632..4891
DNA (1260bp) protein (420aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
xseA; Exodeoxyribonuclease 7 large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHR4_9FIRM
L3_105_000M1_scaffold_596_8
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4979..5638
DNA (660bp) protein (220aa)
DNA-damage-inducible protein D n=1 Tax=Clostridium sp. CAG:440 RepID=R7GC35_9CLOT
DNA-damage-inducible protein D {ECO:0000313|EMBL:CDE24959.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
dinD; DNA damage-inducible protein D
L3_105_000M1_scaffold_596_9
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

5821..6630
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51009.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_10
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

6633..7169
DNA (537bp) protein (179aa)
Acetyltransferase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II56_9FIRM
Acetyltransferase {ECO:0000313|EMBL:CDE51008.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
acetyltransferase
L3_105_000M1_scaffold_596_11
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

7201..7419
DNA (219bp) protein (73aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
xseB; exodeoxyribonuclease VII small subunit XseB (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK72_9FIRM
L3_105_000M1_scaffold_596_12
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists


7429..8841
DNA (1413bp) protein (471aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHR0_9FIRM
L3_105_000M1_scaffold_596_13
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(8908..10194)
DNA (1287bp) protein (429aa)
Stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK63_9FIRM
Stage V sporulation protein B {ECO:0000313|EMBL:CDE50997.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
sporulation stage V protein B
L3_105_000M1_scaffold_596_14
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

10220..12391
DNA (2172bp) protein (724aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHQ0_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDE50996.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
(p)ppGpp synthetase I SpoT/RelA
L3_105_000M1_scaffold_596_15
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

12391..12825
DNA (435bp) protein (145aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH97_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L3_105_000M1_scaffold_596_16
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

12826..13233
DNA (408bp) protein (136aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGQ4_9FIRM
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:CDE50994.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
Dolichol-phosphate mannosyltransferase
L3_105_000M1_scaffold_596_17
unknown

Not on your lists

13309..13488
DNA (180bp) protein (60aa)

This feature has no annotations

L3_105_000M1_scaffold_596_18
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

comp(13416..16322)
DNA (2907bp) protein (969aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50993.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_19
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

16443..17882
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50991.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_20
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

17895..19217
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50989.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_21
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

19245..19949
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50986.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_22
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists


20214..21953
DNA (1740bp) protein (580aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase 1 n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK49_9FIRM
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CDE50982.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_23
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

21961..22683
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50981.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_24
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

22806..23513
DNA (708bp) protein (236aa)
Histidyl-tRNA synthetase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH82_9FIRM
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CDE50980.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_25
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

23522..24535
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50979.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_26
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

24538..25914
DNA (1377bp) protein (459aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7II26_9FIRM
L3_105_000M1_scaffold_596_27
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

25923..26465
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IK45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50977.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
dephospho-CoA kinase-like protein
L3_105_000M1_scaffold_596_28
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

26473..26769
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IHN2_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:CDE50976.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
L3_105_000M1_scaffold_596_29
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

26769..28226
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IH78_9FIRM
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDE50975.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L3_105_000M1_scaffold_596_30
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

Not on your lists

28219..29646
DNA (1428bp) protein (476aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IGN7_9FIRM
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
Displaying items 1-30 of 50 in total

View Taxonomy