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L3_105_000M1_scaffold_2079

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2079_1
unknown

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comp(2..322)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_105_000M1_scaffold_2079_2
unknown

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comp(594..1808)
DNA (1215bp) protein (405aa)

This feature has no annotations

L3_105_000M1_scaffold_2079_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1892..2671)
DNA (780bp) protein (260aa)
Hydrolase NUDIX family n=1 Tax=Clostridium leptum CAG:27 RepID=R6P8G3_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDC06182.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Inorganic pyrophosphatase
L3_105_000M1_scaffold_2079_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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3039..3686
DNA (648bp) protein (216aa)
Flavin reductase-like protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U7K6_9FIRM
Flavin reductase-like protein {ECO:0000313|EMBL:CDC76061.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_105_000M1_scaffold_2079_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3719..4426
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00208.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_105_000M1_scaffold_2079_6
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4743..6500
DNA (1758bp) protein (586aa)
Fibronectin-binding A domain protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SRU6_9CLOT
Fibronectin-binding A domain protein {ECO:0000313|EMBL:CDC63948.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
fibronectin-binding A domain-containing protein
L3_105_000M1_scaffold_2079_7
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6562..7800
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQ15_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99649.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_105_000M1_scaffold_2079_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7903..9513
DNA (1611bp) protein (537aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GF26_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EEU99576.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
L3_105_000M1_scaffold_2079_9
unknown

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9786..10370
DNA (585bp) protein (195aa)

This feature has no annotations

L3_105_000M1_scaffold_2079_10
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10644..11819)
DNA (1176bp) protein (392aa)
Putative membrane protein n=1 Tax=Blautia sp. CAG:257 RepID=R5X0V1_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDA05939.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_105_000M1_scaffold_2079_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(12118..12351)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EPL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX89976.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_105_000M1_scaffold_2079_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12784..14526
DNA (1743bp) protein (581aa)
Ammonium transporter n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIH9_9CLOT
Ammonium transporter {ECO:0000313|EMBL:CCY66620.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ammonium transporter
L3_105_000M1_scaffold_2079_13
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14773..15984)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RT07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF58418.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
hypothetical protein
L3_105_000M1_scaffold_2079_14
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16578..17111
DNA (534bp) protein (178aa)
Ribosomal subunit interface protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NNU4_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDF13777.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
sigma 54 modulation protein/ribosomal protein S30EA
L3_105_000M1_scaffold_2079_15
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17387..18229
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L0N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS52113.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_105_000M1_scaffold_2079_16
unknown

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comp(18576..18755)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 16 items

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