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L3_105_000M1_scaffold_1815

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1815_1
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34..366)
DNA (333bp) protein (111aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Clostridium sp. CAG:964 RepID=R6U710_9CLOT
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDC81488.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_1815_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(452..634)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ES82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02790.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_105_000M1_scaffold_1815_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(634..1473)
DNA (840bp) protein (280aa)
ParB-like partition proteins n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F047_9FIRM
ParB-like partition proteins {ECO:0000313|EMBL:CDB02789.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ParB-like partition proteins
L3_105_000M1_scaffold_1815_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1576..1827)
DNA (252bp) protein (84aa)
Replication initiator protein A n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DD88_CLOS4
Replication initiator protein A {ECO:0000313|EMBL:ERJ00790.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Replication initiator protein A (RepA) N-terminus.
L3_105_000M1_scaffold_1815_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2025..2396)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DV62_CLOS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ00791.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L3_105_000M1_scaffold_1815_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2712..3281)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75595.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_105_000M1_scaffold_1815_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3278..3970)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BWZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75597.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_105_000M1_scaffold_1815_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3967..4848)
DNA (882bp) protein (294aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX00_9CLOT
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EEG75598.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
gamma-carboxymuconolactone decarboxylase subunit like protein
L3_105_000M1_scaffold_1815_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(4824..5447)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PVZ0_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79844.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
bacterial transferase, hexapeptide repeat family
L3_105_000M1_scaffold_1815_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5467..5934)
DNA (468bp) protein (156aa)
Flavodoxin n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX02_9CLOT
Flavodoxin {ECO:0000313|EMBL:EEG75600.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Flavodoxin-like fold.
L3_105_000M1_scaffold_1815_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5957..7408)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75602.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_105_000M1_scaffold_1815_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7421..8086)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75603.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Flavodoxins
L3_105_000M1_scaffold_1815_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8128..8631)
DNA (504bp) protein (168aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Clostridium difficile CD160 RepID=T3D8X8_CLODI
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EQF23943.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
2,5-diketo-D-gluconic acid reductase
L3_105_000M1_scaffold_1815_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8799..8978)
DNA (180bp) protein (60aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Clostridium difficile CD160 RepID=T3D8X8_CLODI
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EQF23943.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
2,5-diketo-D-gluconic acid reductase
L3_105_000M1_scaffold_1815_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8992..9534)
DNA (543bp) protein (181aa)
Flavoredoxin n=2 Tax=Erysipelotrichaceae RepID=B0N0R0_9FIRM
Flavoredoxin {ECO:0000313|EMBL:CCZ32123.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
flavin reductase domain protein FMN-binding protein
L3_105_000M1_scaffold_1815_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9560..9913)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75604.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Predicted transcriptional regulators
L3_105_000M1_scaffold_1815_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10005..10895)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium sp. M62/1 RepID=D4C7M9_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFE14567.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
transcriptional regulator, LysR family
L3_105_000M1_scaffold_1815_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(12006..13367)
DNA (1362bp) protein (454aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003701353
HDIG domain protein {ECO:0000313|EMBL:CCX45316.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_105_000M1_scaffold_1815_19
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13522..13809)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QFH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19872.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_105_000M1_scaffold_1815_20
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(13851..15119)
DNA (1269bp) protein (423aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TUK7_9FIRM
L3_105_000M1_scaffold_1815_21
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(15777..16883)
DNA (1107bp) protein (369aa)
Sorbitol-6-phosphate 2-dehydrogenase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TWP5_9FIRM
Sorbitol-6-phosphate 2-dehydrogenase {ECO:0000313|EMBL:CDC76590.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
dehydrogenase
L3_105_000M1_scaffold_1815_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17032..18291)
DNA (1260bp) protein (420aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7G1L3_9FIRM
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:CDE19872.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
L3_105_000M1_scaffold_1815_23
unknown

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comp(18391..18666)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_105_000M1_scaffold_1815_24
unknown

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comp(18888..19238)
DNA (351bp) protein (117aa)

This feature has no annotations

L3_105_000M1_scaffold_1815_25
unknown

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comp(19570..19881)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289B254
L3_105_000M1_scaffold_1815_26
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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20061..20276
DNA (216bp) protein (72aa)
Conserved domain protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FYS0_9ACTN
Conserved domain protein {ECO:0000313|EMBL:CCY05872.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_105_000M1_scaffold_1815_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20993..21205
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98352.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
Displaying 27 items

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