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L3_105_000M1_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_192_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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342..1337
DNA (996bp) protein (332aa)
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEJ85504.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein; putative Phosphoenolpyruvate/pyruvate domain
L3_105_000M1_scaffold_192_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1417..2532
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45965.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dTDP-glucose pyrophosphorylase
L3_105_000M1_scaffold_192_3
unknown

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2621..2998
DNA (378bp) protein (126aa)

This feature has no annotations

L3_105_000M1_scaffold_192_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3258..4703
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25751.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_105_000M1_scaffold_192_5
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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4895..5473
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TLM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73140.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
HAD superfamily phosphatase
L3_105_000M1_scaffold_192_6
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(5539..6789)
DNA (1251bp) protein (417aa)
Oxidoreductase, Gfo/Idh/MocA family id=3475513 bin=GWF2_Clostridiales_38_85 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
oxidoreductase, Gfo/Idh/MocA family
Tax=GWF2_Clostridiales_38_85_curated
L3_105_000M1_scaffold_192_7
unknown

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6990..7781
DNA (792bp) protein (264aa)

This feature has no annotations

L3_105_000M1_scaffold_192_8
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8060..9943
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQR5_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68736.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_105_000M1_scaffold_192_9
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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comp(10030..10932)
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=4012590 bin=GWF2_Lentisphaerae_52_8 species=Prevotella histicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=GWF2_Lentisphaerae_52_8_curated
L3_105_000M1_scaffold_192_10
CG_Arma_02, Armatimonadetes, Bacteria

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comp(10984..11355)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B621_RUMGN
hypothetical protein
Tax=CG_Arma_02
L3_105_000M1_scaffold_192_11
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(11459..12628)
DNA (1170bp) protein (390aa)
Xaa-Pro dipeptidase (EC:3.4.13.9)
Creatinase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B620_RUMGN
Tax=RBG_16_Aminicenantes_63_16_curated
L3_105_000M1_scaffold_192_12
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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13111..14391
DNA (1281bp) protein (427aa)
galactokinase (EC:2.7.1.6)
GHMP kinase N-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TQD8_9FIRM
GHMP kinase N-terminal domain protein {ECO:0000313|EMBL:CDC75648.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L3_105_000M1_scaffold_192_13
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14385..15335
DNA (951bp) protein (317aa)
Cysteine synthase A {ECO:0000313|EMBL:EET60955.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EET60955.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
cysteine synthase n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B381EE
CysK; cysteine synthase
L3_105_000M1_scaffold_192_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16041..16979
DNA (939bp) protein (313aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ13_9FIRM
L3_105_000M1_scaffold_192_15
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17148..17867)
DNA (720bp) protein (240aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
HAD superfamily (Subfamily IA) hydrolase TIGR02254 n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YED0_9FIRM
HAD superfamily (Subfamily IA) hydrolase TIGR02254 {ECO:0000313|EMBL:CDA19641.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
L3_105_000M1_scaffold_192_16
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17857..18765)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q135_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20009.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
beta-lactamase
L3_105_000M1_scaffold_192_17
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18928..19509)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63647.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_105_000M1_scaffold_192_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19837..20448)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AMM6_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERI67089.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
transcriptional regulator, TetR family
L3_105_000M1_scaffold_192_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20720..21763
DNA (1044bp) protein (348aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NG96_CLOSV
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EDS06382.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
NAD-dependent epimerase/dehydratase
L3_105_000M1_scaffold_192_20
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21988..23292)
DNA (1305bp) protein (435aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YED4_9FIRM
L3_105_000M1_scaffold_192_21
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(23433..24611)
DNA (1179bp) protein (393aa)
LL-diaminopimelate aminotransferase n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HMU5_9FIRM
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:CDB35494.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
LL-diaminopimelate aminotransferase
L3_105_000M1_scaffold_192_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(24592..25446)
DNA (855bp) protein (285aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=3017469 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L3_105_000M1_scaffold_192_23
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25514..26398)
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D505_DESAJ
dihydrodipicolinate synthase
L3_105_000M1_scaffold_192_24
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26996..27889)
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L6N7_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08728.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_105_000M1_scaffold_192_25
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27973..30975)
DNA (3003bp) protein (1001aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium sp. CAG:590 RepID=R5DZS2_9CLOT
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CCX85708.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L3_105_000M1_scaffold_192_26
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31267..32622)
DNA (1356bp) protein (452aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:448 RepID=R6SK73_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC61573.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_105_000M1_scaffold_192_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32955..34361)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W8_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
citrate synthase
L3_105_000M1_scaffold_192_28
unknown

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34475..34729
DNA (255bp) protein (85aa)

This feature has no annotations

L3_105_000M1_scaffold_192_29
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(34631..35671)
DNA (1041bp) protein (347aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TKP9_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDC70294.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
cell envelope-related function transcriptional attenuator common domain protein
L3_105_000M1_scaffold_192_30
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36156..37493
DNA (1338bp) protein (446aa)
PF07136 family protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FU98_9FIRM
PF07136 family protein {ECO:0000313|EMBL:CDE17282.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Predicted metal-dependent enzyme
Displaying items 1-30 of 79 in total

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