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L3_105_000M1_scaffold_892

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_892_1
unknown

Not on your lists

comp(2..451)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_105_000M1_scaffold_892_2
unknown

Not on your lists

comp(456..608)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_105_000M1_scaffold_892_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(605..1000)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39639.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
phage XkdN-like protein
L3_105_000M1_scaffold_892_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1015..1491)
DNA (477bp) protein (159aa)
Phage protein n=2 Tax=Clostridiales RepID=E7GN51_CLOSY
Protein of unknown function (DUF2001).
Uncharacterized protein {ECO:0000313|EMBL:CBL24903.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_105_000M1_scaffold_892_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1587..2885)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG51696.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
phage protein
L3_105_000M1_scaffold_892_6
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2882..3391)
DNA (510bp) protein (170aa)
Phage protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PDQ8_9FIRM
phage protein
Phage protein {ECO:0000313|EMBL:CDC21630.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L3_105_000M1_scaffold_892_7
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3391..3765)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GTL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE30460.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
phage protein
L3_105_000M1_scaffold_892_8
unknown

Not on your lists

comp(3759..4253)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_105_000M1_scaffold_892_9
unknown

Not on your lists

comp(4341..4613)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_105_000M1_scaffold_892_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4716..6062)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPK6_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82554.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_105_000M1_scaffold_892_11
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6305..6715)
DNA (411bp) protein (137aa)
Scaffold n=1 Tax=Leuconostoc citreum LBAE E16 RepID=H1X0D6_LEUCI
minor structural GP20 protein
Minor structural GP20 protein {ECO:0000313|EMBL:ACZ08292.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L3_105_000M1_scaffold_892_12
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6762..8363)
DNA (1602bp) protein (534aa)
Phage portal , SPP1 Gp6-like family protein n=4 Tax=Clostridium difficile RepID=T2W008_CLODI
SPP1 family phage portal protein {ECO:0000313|EMBL:EHO21630.1}; TaxID=742814 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme 1_1_36S.;"
phage portal protein
L3_105_000M1_scaffold_892_13
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8605..9357)
DNA (753bp) protein (251aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXV4_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CDE19511.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
FliA/WhiG family RNA polymerase sigma factor
L3_105_000M1_scaffold_892_14
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9335..9823)
DNA (489bp) protein (163aa)
anti-sigma regulatory factor, serine/threonine protein kinase (EC:2.7.11.1)
Anti-sigma regulatory factor serine/threonine protein kinase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CEK4_9FIRM
Anti-sigma regulatory factor serine/threonine protein kinase {ECO:0000313|EMBL:CDA74055.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_105_000M1_scaffold_892_15
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(9902..10300)
DNA (399bp) protein (133aa)
Stage II sporulation protein id=2752384 bin=GWF2_Clostridiales_36_10 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
anti-sigma-factor antagonist domain-containing protein
Tax=GWF2_Clostridiales_36_10_curated
L3_105_000M1_scaffold_892_16
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10621..12306
DNA (1686bp) protein (562aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47).;"
Ribulokinase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TGE7_CALOO
L-ribulokinase
L3_105_000M1_scaffold_892_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12303..12893
DNA (591bp) protein (197aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLZ0_9FIRM
zinc-binding CMP/dCMP deaminase
L3_105_000M1_scaffold_892_18
unknown

Not on your lists

12948..13316
DNA (369bp) protein (123aa)

This feature has no annotations

L3_105_000M1_scaffold_892_19
unknown

Not on your lists

13306..13683
DNA (378bp) protein (126aa)

This feature has no annotations

L3_105_000M1_scaffold_892_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

14077..14844
DNA (768bp) protein (256aa)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LUL4_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDB87329.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_105_000M1_scaffold_892_21
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14943..16337
DNA (1395bp) protein (465aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIN7_9CLOT
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCY66593.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_892_22
unknown

Not on your lists

16460..16657
DNA (198bp) protein (66aa)

This feature has no annotations

L3_105_000M1_scaffold_892_23
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(16563..17228)
DNA (666bp) protein (222aa)
Lipolytic protein G-D-S-L family n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UH31_9FIRM
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CDC70047.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L3_105_000M1_scaffold_892_24
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17407..17694
DNA (288bp) protein (96aa)
FeoA domain protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AEH2_9CLOT
FeoA domain protein {ECO:0000313|EMBL:CCX41650.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Fe2+ transport system protein A
L3_105_000M1_scaffold_892_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17691..19760
DNA (2070bp) protein (690aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QV48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC25817.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
ferrous iron transport protein B
L3_105_000M1_scaffold_892_26
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19986..21938)
DNA (1953bp) protein (651aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NH98_9CLOT
NAD+ synthetase {ECO:0000313|EMBL:CDC11503.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_892_27
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22049..22393)
DNA (345bp) protein (115aa)
Arsenate reductase and related proteins glutaredoxin family n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LI92_9FIRM
Arsenate reductase and related proteins glutaredoxin family {ECO:0000313|EMBL:CCY72727.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
arsenate reductase
L3_105_000M1_scaffold_892_28
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(22603..23448)
DNA (846bp) protein (282aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein id=4512502 bin=GWC2_Clostridiales_40_7 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
calcium-binding protein
Tax=GWC2_Clostridiales_40_7_curated
L3_105_000M1_scaffold_892_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23495..24634)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67630.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
lipoprotein
L3_105_000M1_scaffold_892_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24618..25649)
DNA (1032bp) protein (344aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC91_9CLOT
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EEG30892.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
Displaying items 1-30 of 41 in total

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