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L3_105_000M1_scaffold_2361

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2361_1
unknown

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comp(45..707)
DNA (663bp) protein (221aa)

This feature has no annotations

L3_105_000M1_scaffold_2361_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1033..1638)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AM21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46576.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_105_000M1_scaffold_2361_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1626..2135)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BTR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57559.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_105_000M1_scaffold_2361_4
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3951..4445)
DNA (495bp) protein (165aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PY66_9PROT
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:CCZ21475.1}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
flavin reductase domain-containing FMN-binding protein
L3_105_000M1_scaffold_2361_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4465..5013)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36461.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_105_000M1_scaffold_2361_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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5206..5547
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YE33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14583.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Predicted transcriptional regulators
L3_105_000M1_scaffold_2361_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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6658..6873
DNA (216bp) protein (72aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EMT8_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDB01923.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
transcriptional regulator
L3_105_000M1_scaffold_2361_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6874..7608
DNA (735bp) protein (245aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EXR5_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDB01924.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
multidrug ABC transporter ATPase
L3_105_000M1_scaffold_2361_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

7589..8242
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01925.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_105_000M1_scaffold_2361_10
unknown

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8364..8948
DNA (585bp) protein (195aa)

This feature has no annotations

L3_105_000M1_scaffold_2361_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9738..10169)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PWC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22786.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_000M1_scaffold_2361_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10340..11152)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3ARW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25706.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_105_000M1_scaffold_2361_13
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11154..12185)
DNA (1032bp) protein (344aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFM38627.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFM38627.1};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QKR0_9FIRM
sugar translocase
L3_105_000M1_scaffold_2361_14
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12322..14136)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQR5_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68736.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_105_000M1_scaffold_2361_15
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14154..14849)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPM3_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68737.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_105_000M1_scaffold_2361_16
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14842..15564)
DNA (723bp) protein (241aa)
VTC domain protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VT72_CLOSH
VTC domain-containing protein
VTC domain protein {ECO:0000313|EMBL:AGC68738.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_105_000M1_scaffold_2361_17
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15847..17151)
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113 str. W5053.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JFU2_9FIRM
histidine kinase
L3_105_000M1_scaffold_2361_18
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17144..17821)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TAU1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EGL38920.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
transcriptional regulator
L3_105_000M1_scaffold_2361_19
Clonorchis sinensis, Clonorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

Not on your lists

comp(17845..18513)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clonorchis sinensis RepID=G7Y3S0_CLOSI
Uncharacterized protein {ECO:0000313|EMBL:GAA47606.1}; TaxID=79923 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis.;" source="Clonorchis sinensis (Chinese liver fluke).;"
hypothetical protein
L3_105_000M1_scaffold_2361_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

18787..19368
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI000375C046
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CDD31358.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
TetR family transcriptional regulator
L3_105_000M1_scaffold_2361_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

19537..21057
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=root RepID=R5B2N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45716.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_2361_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

21054..21773
DNA (720bp) protein (240aa)
Nitrogen regulatory protein P-II n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQQ4_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCX45715.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_2361_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22323..22982
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C852_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74334.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_105_000M1_scaffold_2361_24
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23005..23685
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KLK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67720.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_2361_25
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23706..23879
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L331_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67721.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_2361_26

Not on your lists

comp(24008..27211)
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1393515 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1777_n_1791_cl.;"
carbamoyl-phosphate synthase large chain/diaminopimelate epimerase (EC:5.1.1.7 6.3.5.5)
Carbamoyl-phosphate synthase large chain/diaminopimelate epimerase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UZ59_9FIRM
Displaying 26 items

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