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L3_105_000M1_scaffold_1385

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1385_1
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1068)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:798 RepID=R6X4Y4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD16640.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
hypothetical protein
L3_105_000M1_scaffold_1385_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1339..2178)
DNA (840bp) protein (280aa)
Hydro-lyase Fe-S type tartrate/fumarate subfamily alpha subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I833_9FIRM
hypothetical protein
Hydro-lyase Fe-S type tartrate/fumarate subfamily alpha subunit {ECO:0000313|EMBL:CDB42634.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_105_000M1_scaffold_1385_3
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3371..4087
DNA (717bp) protein (239aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN (EC:3.2.2.9)
5''-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CNW2_THETY
L3_105_000M1_scaffold_1385_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4145..5728
DNA (1584bp) protein (528aa)
Stage V sporulation protein B n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUM6_9CLOT
Stage V sporulation protein B {ECO:0000313|EMBL:EOD00347.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
spoVB; stage V sporulation protein B
L3_105_000M1_scaffold_1385_5
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5760..6470
DNA (711bp) protein (237aa)
MazG family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L552_9FIRM
MazG family protein {ECO:0000313|EMBL:CDE82337.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
MazG family protein
L3_105_000M1_scaffold_1385_6
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

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6514..6789
DNA (276bp) protein (92aa)
DNA-binding protein HBsu n=2 Tax=Staphylococcus pseudintermedius RepID=E8SHF9_STAPH
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADH99643.1}; TaxID=439292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).;"
L3_105_000M1_scaffold_1385_7

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6873..7115
DNA (243bp) protein (81aa)
RNA-binding S4 domain protein n=2 Tax=human gut metagenome RepID=K1SBC3_9ZZZZ
RNA-binding S4 domain protein {ECO:0000313|EMBL:EKC44706.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
S4 domain-containing protein
L3_105_000M1_scaffold_1385_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7178..7450
DNA (273bp) protein (91aa)
Sporulation protein YabP n=9 Tax=Clostridium RepID=G5HXU4_9CLOT
Sporulation protein YabP {ECO:0000313|EMBL:ENZ12175.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sporulation protein YabP
L3_105_000M1_scaffold_1385_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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7452..7805
DNA (354bp) protein (118aa)
Spore cortex protein YabQ (Spore_YabQ) id=3837352 bin=GWF2_Clostridiales_36_10 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
spore cortex biosynthesis protein YabQ
Tax=GWF2_Clostridiales_36_10_curated
L3_105_000M1_scaffold_1385_10
unknown

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7810..8079
DNA (270bp) protein (90aa)

This feature has no annotations

L3_105_000M1_scaffold_1385_11
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8103..8501
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI00037FF69B
rp-S1 RNA binding domain protein
Rp-S1 RNA binding domain protein {ECO:0000313|EMBL:CCG43464.1}; TaxID=866895 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 /; NBRC 102448/ NCIMB 2269) (Sporosarcina halophila).;"
L3_105_000M1_scaffold_1385_12
unknown

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8654..8869
DNA (216bp) protein (72aa)

This feature has no annotations

L3_105_000M1_scaffold_1385_13
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8897..9679
DNA (783bp) protein (261aa)
AP endonuclease, family 2 superfamily protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q2L3_CLONN
xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CDZ23192.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_105_000M1_scaffold_1385_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9682..11424
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPA0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO62787.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_105_000M1_scaffold_1385_15
unknown

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11657..11842
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_000M1_scaffold_1385_16
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12570..14336
DNA (1767bp) protein (589aa)
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCY8_9FIRM
L3_105_000M1_scaffold_1385_17
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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14408..14773
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LWI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO51579.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L3_105_000M1_scaffold_1385_18
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15279..16061
DNA (783bp) protein (261aa)
Restriction endonuclease n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3R3_9CLOT
Restriction endonuclease {ECO:0000313|EMBL:CCY67677.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Restriction endonuclease
L3_105_000M1_scaffold_1385_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16714..17565
DNA (852bp) protein (284aa)
Putative surface/cell-adhesion protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RU89_9CLOT
Putative surface/cell-adhesion protein {ECO:0000313|EMBL:CDC38007.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_1385_20
unknown

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17565..18692
DNA (1128bp) protein (376aa)

This feature has no annotations

L3_105_000M1_scaffold_1385_21
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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19549..20319
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26641.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Zn-dependent hydrolases, including glyoxylases
L3_105_000M1_scaffold_1385_22
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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20541..23528
DNA (2988bp) protein (996aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82403.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
L3_105_000M1_scaffold_1385_23
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23549..24589
DNA (1041bp) protein (347aa)
Glucosamine 6-phosphate synthetase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JAY2_9CLOT
glucosamine 6-phosphate synthetase
Glucosamine 6-phosphate synthetase {ECO:0000313|EMBL:AEY67429.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_105_000M1_scaffold_1385_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24602..25981
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VV64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD02603.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
Displaying 24 items

View Taxonomy