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L3_105_000M1_scaffold_1391

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1391_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..639
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69064.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
HpcH/HpaI aldolase
L3_105_000M1_scaffold_1391_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

642..1052
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B472_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46286.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
L3_105_000M1_scaffold_1391_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1147..1551
DNA (405bp) protein (135aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDK24242.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDK24242.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMM3_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase
L3_105_000M1_scaffold_1391_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1595..1957
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037E9DED
Uncharacterized protein {ECO:0000313|EMBL:CCY90128.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_105_000M1_scaffold_1391_5
MPI_TA06_32_111, Bacteria

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1908..2669
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037E9DED
Tax=MPI_TA06_32_111
L3_105_000M1_scaffold_1391_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2779..3246
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037E9DED
Uncharacterized protein {ECO:0000313|EMBL:CDB51917.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L3_105_000M1_scaffold_1391_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3267..4403
DNA (1137bp) protein (379aa)
Glycosyl transferases group 1-like protein (EC:2.4.1.56)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HDA7_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS01894.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L3_105_000M1_scaffold_1391_8
unknown

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4580..4732
DNA (153bp) protein (51aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_9
unknown

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comp(4736..6172)
DNA (1437bp) protein (479aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_10
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6266..6433)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P4Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPD58326.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_105_000M1_scaffold_1391_11
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(8159..8776)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TP01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69616.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_105_000M1_scaffold_1391_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(9822..10457)
DNA (636bp) protein (212aa)
Signal peptidase I n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2T8_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CCX74530.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
signal peptidase I
L3_105_000M1_scaffold_1391_13
unknown

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comp(10513..10737)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11225..12016)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036E0B2A
AraC family transcriptional regulator
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_105_000M1_scaffold_1391_15
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12203..14347
DNA (2145bp) protein (715aa)
pyruvate formate-lyase (EC:2.3.1.54)
Formate acetyltransferase 2 n=1 Tax=Clostridium sp. CAG:448 RepID=R6SPH8_9CLOT
Formate acetyltransferase 2 {ECO:0000313|EMBL:CDC63123.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_105_000M1_scaffold_1391_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14344..15225
DNA (882bp) protein (294aa)
glycyl-radical enzyme activating family protein (EC:1.97.1.-)
Glycyl-radical enzyme activating family protein {ECO:0000313|EMBL:ACD22872.1}; EC=1.97.1.- {ECO:0000313|EMBL:ACD22872.1};; Pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:CDH90424.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CDH90424.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
ferredoxin n=1 Tax=Clostridium botulinum RepID=UPI0002DE43B5
L3_105_000M1_scaffold_1391_17
unknown

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comp(15505..16020)
DNA (516bp) protein (172aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_18
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16097..17905)
DNA (1809bp) protein (603aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6T636_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC63271.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
antibiotic ABC transporter ATP-binding protein
L3_105_000M1_scaffold_1391_19
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17886..19739)
DNA (1854bp) protein (618aa)
ABC transporter related n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EL01_9FIRM
ABC transporter related {ECO:0000313|EMBL:CDE02973.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ABC transporter
L3_105_000M1_scaffold_1391_20
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

Not on your lists

comp(19717..20757)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VDM022 RepID=J8MXX8_BACCE
aminopeptidase
Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
L3_105_000M1_scaffold_1391_21
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20754..22577)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C115_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59117.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
fatty-acid binding protein
L3_105_000M1_scaffold_1391_22
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22578..24398)
DNA (1821bp) protein (607aa)
Peptidase S8/S53 family n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FWM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEO84423.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
L3_105_000M1_scaffold_1391_23
unknown

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comp(24484..24588)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_24
unknown

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comp(24626..24850)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_105_000M1_scaffold_1391_25
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24872..26224)
DNA (1353bp) protein (451aa)
Radical SAM domain protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEO84421.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
radical SAM protein
Displaying 25 items

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