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L3_105_000M1_scaffold_5024

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_5024_1
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1459)
DNA (1458bp) protein (486aa)
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X9J5_9FIRM
Threonine synthase {ECO:0000313|EMBL:CDD02997.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_105_000M1_scaffold_5024_2
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2446..2820)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q3X8_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
50S ribosomal protein L7/L12
L3_105_000M1_scaffold_5024_3
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2894..3418)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTT1_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
rplJ; ribosomal protein L10
L3_105_000M1_scaffold_5024_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3652..4215)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80979.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_000M1_scaffold_5024_5
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(4246..4749)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PW85_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79939.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L3_105_000M1_scaffold_5024_6
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5649..6257)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JEY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27135.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_105_000M1_scaffold_5024_7
unknown

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comp(6250..6795)
DNA (546bp) protein (182aa)

This feature has no annotations

L3_105_000M1_scaffold_5024_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6809..7882)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DT40_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
prfA; Peptide chain release factor 1
L3_105_000M1_scaffold_5024_9
unknown

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7981..8205
DNA (225bp) protein (75aa)

This feature has no annotations

L3_105_000M1_scaffold_5024_10
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8198..8422
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPI4_9CLOT
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Uncharacterized protein {ECO:0000313|EMBL:CDE90495.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
Displaying 10 items

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